Gene Clim_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1990 
Symbol 
ID6355494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp2208976 
End bp2209614 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content52% 
IMG OID642669588 
Productendonuclease III 
Protein accessionYP_001944001 
Protein GI189347472 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTCT CTGTAGAAGA AAAAATCGGC TTTATCAGGA CAGCGCTTGG CCGGATCTAT 
CCCGAACCAA AAAGCGAACT GATCTACGAC TCCCCTTTTC AGCTGCTGAT TGCGACTATT 
CTTGCCGCGC AGGCTACCGA CAAACAGGTT AACATACTCA CCAAAAAGCT CTTCGACGTT 
TGCCCGGATG CGACAACGAT GAGCATGACG GATCCGGAAA CCATCAGGGA TCTTGTCCGT 
TCGATAAACT ATTGCAACAA CAAGGCAAAG AATATCCTTG CGGTCAGCAA AAAGCTGGTC 
GAGGAGTATG AAGGAGAGGT GCCTGCATCG AGGGAAGCGC TGGAAAGCCT GCCGGGGGTC 
GGCAGAAAAA CCGCCAATGT CGTTCTGAGC AACGCTTTCC GGCAGCCGGT CATGCCGGTC 
GATACCCATG TGCACCGGGT ATCGAACCGG ATCGGACTGG TTAAAACGTC AAAACCCGAG 
AATACCGAAA CCGAACTTAT CAAGGTCATT CCCGAGGCCT GGGTTATCGA TTTCCACCAC 
TATCTCCTGC TGCATGGCCG TTATACCTGC AAGGCAAAAA AGCCTGAATG TCAGGGATGC 
GTGCTCAGGG ATATCTGCGA CTGGCCCGAA AAAAGCTGA
 
Protein sequence
MSFSVEEKIG FIRTALGRIY PEPKSELIYD SPFQLLIATI LAAQATDKQV NILTKKLFDV 
CPDATTMSMT DPETIRDLVR SINYCNNKAK NILAVSKKLV EEYEGEVPAS REALESLPGV 
GRKTANVVLS NAFRQPVMPV DTHVHRVSNR IGLVKTSKPE NTETELIKVI PEAWVIDFHH 
YLLLHGRYTC KAKKPECQGC VLRDICDWPE KS