Gene Clim_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1981 
Symbol 
ID6355485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp2199059 
End bp2199565 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content53% 
IMG OID642669579 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_001943992 
Protein GI189347463 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.119158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAC TGACAAAAAA TACCGATTAC GCAATCCGCG CCCTGCTGTC GCTTGGATCT 
GCAAATGGAG GGTATCTCTC GGCAAGGTCT ATCGCAGGGG AGCAGGATAT TCCCTATCAG 
TTTTTGCGCA GGCTGTTGCA GGAGATGATA CGTCACGGTC TCGTCGTTTC TAAAGAGGGA 
GCCGGCGGCG GTTTTATGCT GGCCAGGAAT CCTCATGACA TAAGGGTAAG AGAGCTGATC 
GAGATATTCC AGGGCAGGGT GCAGGTTTCT GAGTGCCTGT TCCGCAAGCA GATATGCGCA 
AATCGCGCAC GATGCGTGCT TCGTCACGAG ATCATGCGCA TCGAGCAGGT GGTCGAGAGG 
GAGTTCGACA ACATCACGAT CGGCAAGCTG CTCGGCGATC TGGAGGCAGC CAACGCCCGG 
AGCGCTCACG GATGTATTTC GTCTGCCTCT ACTGCAGGGA ATGGGAAGGA TATGAAACAT 
GAAACAACAG GGAAAACAAG ACAATGA
 
Protein sequence
MKVLTKNTDY AIRALLSLGS ANGGYLSARS IAGEQDIPYQ FLRRLLQEMI RHGLVVSKEG 
AGGGFMLARN PHDIRVRELI EIFQGRVQVS ECLFRKQICA NRARCVLRHE IMRIEQVVER 
EFDNITIGKL LGDLEAANAR SAHGCISSAS TAGNGKDMKH ETTGKTRQ