Gene Clim_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1980 
Symbol 
ID6355484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2198160 
End bp2199062 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content62% 
IMG OID642669578 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_001943991 
Protein GI189347462 
COG category[C] Energy production and conversion 
COG ID[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.167299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAC AGATCATCAC CATAGATGAA AAAAAGTGCA CGGGGTGCGG CGATTGCATA 
CCGGGATGTC CTGAGGGCGC ACTGCAACTG ATAGACGGCA AGGCCCGACT CGTCAGCGAT
CTTTTCTGCG ACGGGCTTGG AGCCTGCATC GGCCACTGCC CGACCGGGGC GATGCGCATA
GAAGAGCGGG AGGCGGAGCC GTACGACGAG AAGCGCGTGA TGCAGGAGAG CATCGTCAGG
GGCGGACCGA ACGTTATCGC CGCCCATCTG CGGCACCTGC GCGACCACGG CGCAGACAAC
TACCTGCAGG ATGCGCTCGA CTATCTCGAA GCGGCAGGTA TTGCCAATCC GCTCGAACTT
GCCGGCCAGG AGGCTGCGGT GCCGTGTCAT CAGGCGGAGC ACGCTCCTCC GGCCCACGGG
CATCACGGCG GAGGCTGCCC GGGCAGCCGG ACGATGGATT TCCGTTCCGC TAACGGTCAT
GCGGCGTCAG CGACGCCTGC AGCTCGCGAG ACTGCGGCTT CCAGCGAACT GCGCCAGTGG
CCGGTCCAGC TGCATCTTGT CTCTCCGCTG GCTCCTTACT ACGAGGGTTC CGATCTGTTG
CTTGCCGCCG ACTGTACGGC ATTCGCTGCC GGAGATTTCC ACCGCTCGCT GCTTCAGGGC
AGGACGCTTG CCGTCGCATG CCCGAAGCTC GACAGCGGCA TGGATGTTTA TGTCGAGAAG
CTTGTGGCCA TGATAGACAT GGCGCGCATC AACACCATCA CGGTGGCCAT CATGGAGGTT
CCCTGCTGCG GAGGGCTCAT GTCGATCGTT TCGGAAGCGC AGAAGCGCGC AAAGCGCAAG
GTTCCGGTCA GGAAGATCGT TATCGGCGTG CAGGGGAACA AACTCGGCGA GGAGTGGGTG
TGA
 
Protein sequence
MKRQIITIDE KKCTGCGDCI PGCPEGALQL IDGKARLVSD LFCDGLGACI GHCPTGAMRI 
EEREAEPYDE KRVMQESIVR GGPNVIAAHL RHLRDHGADN YLQDALDYLE AAGIANPLEL
AGQEAAVPCH QAEHAPPAHG HHGGGCPGSR TMDFRSANGH AASATPAARE TAASSELRQW
PVQLHLVSPL APYYEGSDLL LAADCTAFAA GDFHRSLLQG RTLAVACPKL DSGMDVYVEK
LVAMIDMARI NTITVAIMEV PCCGGLMSIV SEAQKRAKRK VPVRKIVIGV QGNKLGEEWV