Gene Clim_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1976 
Symbol 
ID6355480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp2193524 
End bp2194267 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content49% 
IMG OID642669574 
Producthypothetical protein 
Protein accessionYP_001943987 
Protein GI189347458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000908026 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACT TCACGAAAAA AACCTCAGGG ATAGTCCTGC TTTCGGCTCT CGTTCTTTTT 
TCCGGCTGTT CAAAATCCGA TAACCCGGTA TCCAATGCAG TCTCTTCACT CACTTCCGAA 
TCACAGCCAA AGCGTTACGA GATAAAATCG GGTATCGTGC ACTATGCCCC TATGAACCTC 
ATGGGCATGG GAACAACTAC CGAAACCCTC TATTTCGACG ATTATGGCCG GAAAGAGGCT 
GTGGAAACCA TTACGGAATC AAACGTGATG GGAATCAAAA CCTATGAACA CCGGGTGCAG 
ATCACGGACG GTACGATCGG TATTTCCTAC GAAATCAGGA AAACCGTCAA CGGCAAGGAC 
GAAACGAGCA AGGTTGCCCA AAAAGGCGAT ATCAGCGAGT TCCAGGACAT GGCGAAGATG 
ATGGCCTCGA CGATGGACAT CAACGAACTG AAGAAAAATA TGGATTATCG CGAGGAGGGA 
ACGGAAACGA TCGCAGGCGT AACAGGGAAA AAGTATTCGG TAGCCATGAA CAAGGAACAG 
CCCGATGCGC GCGTTTACGG TGTTATGTAC AAAAACATCG TCCTGAAAAG CGAAATGGGC 
TCCATCAGCA AGACAGCCGA ACGTATTGAG GAAAACGCAG CCGTACCGGC ATCGAAATTC 
GCAATTCCGG AGGGATACAC CGTCGAAGAG GTCAACCTTG CCGAAGAGAT GAAAAAGGCT 
GGCATGGAAG AATCCGAAGA GTAA
 
Protein sequence
MKHFTKKTSG IVLLSALVLF SGCSKSDNPV SNAVSSLTSE SQPKRYEIKS GIVHYAPMNL 
MGMGTTTETL YFDDYGRKEA VETITESNVM GIKTYEHRVQ ITDGTIGISY EIRKTVNGKD 
ETSKVAQKGD ISEFQDMAKM MASTMDINEL KKNMDYREEG TETIAGVTGK KYSVAMNKEQ 
PDARVYGVMY KNIVLKSEMG SISKTAERIE ENAAVPASKF AIPEGYTVEE VNLAEEMKKA 
GMEESEE