| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1970 |
|---|
| Symbol | |
|---|
| ID | 6355474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 2186317 |
|---|
| End bp | 2187618 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642669568 |
|---|
| Product | Ribulose-bisphosphate carboxylase |
|---|
| Protein accession | YP_001943981 |
|---|
| Protein GI | 189347452 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000163094 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTG AGGATATCAA AGGTTTTTTT GCCTCACCTG AACAGCTCGA TATGGCTGAC
TACCTCATAC TCGATTACTA TCTGGAGTGT GTCGGCGATA TCGAGACTGC ACTGGCTCAT
TTCTGCAGTG AGCAGTCCAC GGCACAATGG AGGCGTGTAG GGTTCGACGA GGATTTCAGA
CCGCTTTACG CTGCCAGGGT TATTCATCTT ACCGTTGAAG GCGAACTTCC TGAACTCAGT
TATCCGGTCA AACACTCTGA GACCGGGCCT GTTCACGCCT GTCGGGTGAC CATTGCGCAT
CCCCACCGCA ACTTCGGCCC GAAGCTGCCG AACCTGCTCA GTGCGGTTTG CGGAGAGGGC
GCATTCTTCA CGCCGGGGGT ACCTGTCGTG AAGCTGCTCG ATATAACGTT TCCCGAATCC
TATCTCAATG CCTTTGACGG TCCGAAATTC GGCATTGAAG GTATTCGCGA TATTCTGCAG
GCATACGACC GGCCGATTTT TTTCGGGGTC GTGAAACCCA ATATCGGCCT CAAGCCATCT
TGTTTTGCTG AAATTGCATA TCAGAGCTGG CTTGGCGGTC TCGATATTGC CAAGGATGAC
GAGATGCTGG CCGATGTTGA TTGGTCCACG CTCGAGGAGC GCTCCCGTGA GCTGGGCGCG
GCCCGCATGA GGGCTGAAAA AGAGACCGGC GAACCGAAAA TCTATCTTGC CAACGTCACT
GACGAGGTTG ACCGTCTGAT TGAGCAGCAT GATATTGCCG TGAGTAACGG GGCCAACGCT
CTCCTCATCA ATGCGCTGCC CGTAGGCCTC AGTGCGGTGA GAATGCTGGC GAAGCATACG
AAAGTTCCGC TCATCGGACA TTTTCCCTTT ATAGCCGCAT TCAGTCGTCT CGAAAAATAC
GGTGTTCATT CAAGGGTGAT GACCAAACTG CAGCGGCTTG CCGGTCTTGA TTCCATCATC
ATGCCGGGTT TCGGCAGCCG GATGATGACT CCCGAAGAGG AGGTCATGGA CAATATCCGG
GAGTGTCTGC AGGATTTCGG CCATATACGG ACTTCATTGC CGGTTCCTGG CGGAAGCGAT
TCTGCATTGA CGCTTGAAAC GGTTTACCGT AAAGTCGGGA GTTTCGATTT CGGTTTCGTA
CCGGGACGAG GCATTTTCGG TCATCCTATG GGTCCCAAAG CCGGAGCTGC AAGCATTCGT
CAGGCATGGG AGGCGATCAG ACAGGGAGTG CCGATTGAAA TCTATGCCCA GGGCCGACCC
GAACTGCAGG CTATGATCGA TGGCGCCGCG GCAAAGCAAT AA
|
|---|
| Protein sequence | MNTEDIKGFF ASPEQLDMAD YLILDYYLEC VGDIETALAH FCSEQSTAQW RRVGFDEDFR
PLYAARVIHL TVEGELPELS YPVKHSETGP VHACRVTIAH PHRNFGPKLP NLLSAVCGEG
AFFTPGVPVV KLLDITFPES YLNAFDGPKF GIEGIRDILQ AYDRPIFFGV VKPNIGLKPS
CFAEIAYQSW LGGLDIAKDD EMLADVDWST LEERSRELGA ARMRAEKETG EPKIYLANVT
DEVDRLIEQH DIAVSNGANA LLINALPVGL SAVRMLAKHT KVPLIGHFPF IAAFSRLEKY
GVHSRVMTKL QRLAGLDSII MPGFGSRMMT PEEEVMDNIR ECLQDFGHIR TSLPVPGGSD
SALTLETVYR KVGSFDFGFV PGRGIFGHPM GPKAGAASIR QAWEAIRQGV PIEIYAQGRP
ELQAMIDGAA AKQ
|
|---|
| |