Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1969 |
Symbol | |
ID | 6355473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2185455 |
End bp | 2186339 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642669567 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001943980 |
Protein GI | 189347451 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000507932 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCCGC GGCAAAGCAA TAAACGCCCA TCAGCAGAGG GGATTGACCG TTCCCGGCAG AAGGGGCGGC TTGAAGGCCG GGTTGCCGTC ATTACCGGTT CGACGAGAGG CATCGGCAAG GCCATCGCCC GACGGTTCGT CGATGAAGGC GCCAGGGTTG TCATCACCTC TTCATCACCG CACAACGTTG ATGCCGCTGT TGCTGCATTT GTTCCGGGAA CCGTTTACGG TTATGCCTGC GACGTCAGTT CTCCGGCTGA AATGGAACGC CTTGTCGAAG CTTCGGCAGC CCGTTTCGGC AGAATCGACT GTTTTATCAA CAATGCCGGC ATATCGGATC CGTTCGGCAA TATTACCTCC AGTGATCCCG CTCAATGGGG ACGGGTGATC GATACCAACC TCAAAGGCAC CTACAACGGC TGCCGGGCGG CAATCGGTTA TTTTCTTCGC GAAAATATTT CCGGCAAGAT AATCAACATG GCCGGGTCAG GCACCGATCG CGGATCGAAT ACTCCTTTTA TTACGGCGTA TGGCTCCACC AAGGCCGCCA TTGCCCGCTT AACCTTTGCT GCGGCCGCCG AGTACCGCCA GAGCGATCTT TCCATCATGC TGCTTCACCC AGGGCTTGTA CGTACCGGCA TGGTCAGCGC CGAAAATCCG ACGCCCGAAC TTCTCCGGCA GCTTGCTACA TTCAACACCA TTCTCGATAT TTTTGCCCAG CCACCATCGG TTGCCGCAGG ACTGGCCGTG AAAATGGCCT CATCCTGGAG TGACCGCAAA ACCGGCATCT ATCTTTCCGC GTTGAACGAA TGGACAAAAA AGAGGTTGCT CCTCAGTTAT CCCTTCCGTA AACTGACCGG CAGGATAGAG CGGGAAACCT ATTAA
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Protein sequence | MAPRQSNKRP SAEGIDRSRQ KGRLEGRVAV ITGSTRGIGK AIARRFVDEG ARVVITSSSP HNVDAAVAAF VPGTVYGYAC DVSSPAEMER LVEASAARFG RIDCFINNAG ISDPFGNITS SDPAQWGRVI DTNLKGTYNG CRAAIGYFLR ENISGKIINM AGSGTDRGSN TPFITAYGST KAAIARLTFA AAAEYRQSDL SIMLLHPGLV RTGMVSAENP TPELLRQLAT FNTILDIFAQ PPSVAAGLAV KMASSWSDRK TGIYLSALNE WTKKRLLLSY PFRKLTGRIE RETY
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