Gene Clim_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1963 
Symbol 
ID6355018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2177150 
End bp2177896 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content53% 
IMG OID642669561 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001943974 
Protein GI189347445 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.075566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGG GTTTTTTTAC GGGTCTGCTT ATCGTTGTGA CCTACGCCGT TTCTCTGGGT 
TTCTATGCCT GGATGGGCAC TACGCCTCCG GAATCGATGT TTCATGCCGT CTGGAAAGGC
GGGCCGGTCG TATCGGTGCT GATGGCGCTT ATTATGATGG TGATCGCTTA TATCGTCGAG
CGCATCATCG CGCTCAACAA AGCTTCCGGC AAAGGAAACA TTCCCCAGTT TGTGCAGAGC
CTGAAGCAGG ATATCGAGAA TGGCTCCATT GACGAAGCGA TCGCAAAATG CGACGACCAT
CAGAGTTCGC TCTCTGCCGT GCTTCGCGCC GTGCTCGACC GGTACAGGAA AATGGTGAGC
ATGAACGTCA CCGACCGCGA CAAGAAGATC AGCGAAATGG AAAAAGCGGT GGAAGAGGCT
ACGGTTATGG AGATGCCACT CCTCGAGAAA AATCTTGTGG CTATCTCAAC CATCGCATCG
ATCTCGACCA TGGTTGGGCT TCTTGGCACC ACGCTCGGCA TGATCCGTGC ATTTGCCGCC
ATGGCCACAA GCGGAGCCCC CGATGCCGTG CAGCTTTCGA TGGGTATTTC CGAAGCCCTT
TTCAATACCG CGCTCGGCAT TGTCGGCGGA ATTATGGGCA TCGTTACCTA CAACGTGTTC
ACCAACAAGG TCGATCATTT CAACTACATG ATCGACGAAG CTGCCTTCTA CATCATCCAG
ACCCTTGGAA CCGGTAAAAC ACAATAA
 
Protein sequence
MKQGFFTGLL IVVTYAVSLG FYAWMGTTPP ESMFHAVWKG GPVVSVLMAL IMMVIAYIVE 
RIIALNKASG KGNIPQFVQS LKQDIENGSI DEAIAKCDDH QSSLSAVLRA VLDRYRKMVS
MNVTDRDKKI SEMEKAVEEA TVMEMPLLEK NLVAISTIAS ISTMVGLLGT TLGMIRAFAA
MATSGAPDAV QLSMGISEAL FNTALGIVGG IMGIVTYNVF TNKVDHFNYM IDEAAFYIIQ
TLGTGKTQ