Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1948 |
Symbol | |
ID | 6355003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 2160659 |
End bp | 2162611 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642669546 |
Product | ABC transporter related |
Protein accession | YP_001943959 |
Protein GI | 189347430 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAG CCCGAAATCT CTCCCTCAGC GTAGGCACCA AGGAACTGCT TGCCGATTCA TCATTCCGTA TCGGCGACCG GGACCGCGTT TCGCTGGTCG GCATGAACGG AACCGGCAAG TCAACCCTGC TGAAACTTAT CAGCGGCACA TCGTCCGAAA GCACGATCGT AACCGAGGGG CAGTTTCTGA AATCGGCAGA TACCAGCATC GGTTACCTGC CCCAGGAAAT TTCCTTCGAT GACGATCTGG AAAAAACCGC ACTGCAGTAC GCCATGCATG CCAATATCCG TCTGTTCGAG CTTTCGGAAA CCATTGCACA ACTTGAACAC GAGCTTGCTT TGCCGGATCA GGATCATGCG GGCGAGGCCT ACCACAGGCT GATTGAACGG TTCACCGACG CCATGCACGA TTTCGATCAT CACGGAGGCT ATACCATGCG TGCCCAGGCT GAAAAAATGC TTTCGGGACT CGGATTCAGC GAAGCTGATT TTCACAAGAA AGTAAAGGCG TTTTCAGGAG GGTGGCAGAT GCGCCTCCTC ATTACCCGCC TTCTCCTGCA GAATCCTACC CTGCTCCTGC TCGACGAACC AACGAACCAT CTCGATATCG ATTCGCTTCG CTGGCTCGAG AACTATCTGC AGAACTATGA ACACAGCTGC ATTATCGTTT CGCACGACCG CTTCTTCCTC GACAAACTGA CGACGAGAAC CCTTGAAATC GCCTTTCAGC GCATCGAAGA GTACAAGGGA AACTACTCGT ATTACGAAAA GGAAAAAGCG GCCCGCTACG AGCTTATGAT GAGCCGGTAC GCAAACGATC TGAAAAAAGC CGCCGAGCTC AAGGCGTTCG TCGACCGGTT CCGATACAAG GCCACCAAGG CACGGCAGGC ACAAAGCCGG CTCCGCCAGC TTGAAAAACT CGAACAGGGG CTGCAGGCGC CTGAAGAGGA TCTCTCGCAG ATATCCTTCA GGTTTCCCAA GGCAAATCCT TCGGGCCGCG AGGTCATGCG ACTCGAGGGT ATCGGCAAAA CCTACACCCT GCCGGACGGC ACCCCAAAGC AGGTGCTCCG TAATATCAAT CTCGAGGTTC TCCGAGGCGA CCGCATCGCC ATAGTCGGAT CGAACGGAGC GGGAAAAACC ACTTTCTGTA AAATCCTTGC GGGTGAAATC GATTTTGAAG GAAAGCTTTC GACCGGACAC AATGTCAGCC TGAACTATTT CGCCCAGCAT CAGACCGAAA ATCTCGATAC TGAAAAAACC GTTTACAAGG AGATGCTCGA TGCCGCTCCG ACTTCGGAAG CCCAGAAAAA AATACGCGAC ATCCTCGGCT GTTTCCTTTT CAGCGGTTCT GCAGTCGAAA AAAAAATCGG AGTGCTGTCG GGAGGTGAAA AATCGCGGGT TGCCCTGGCC CGAATACTGC TTCAGGCTTC GAATCTGCTG ATCATGGATG AACCGACCAA CCACCTCGAC ATGCGCTCGA AAGAGATGCT GATCGATGCG CTTGAAAACT ATGACGGCAC CCTGCTGCTG GTCAGCCATG ACCGATACTT CCTCGACAGT CTGGTCAACA AGGTCATTGA AATCAAGAAC GGCGGACTGC AGCTCTACCA CGGAACCTAC GCAGAATATC TTGAAAAGGC CGAAAAAGCC CTCGAGGAGG AGAGAGTGCT GGAGAGTGCA CGGCAGAAAG CCGAAGCTGC AGCAGCAAAA ATCAGTAAAG TTCCCCAGGC AAAACCTGCT CCTGCGCCTA AAAAAAATCA CAGGAAAATC GAGTCGATCG AAAAAAACAT ACAGGCGCTC GAACAGCGGA AGGAGAACCT GGAAACGGTC ATGGCATCCG ATGAGTTTTA TAAACAGTCT CCTGAAGCGA CAAAAAAAAC ACTCGCCGAG TACCATACTC TCGGGGCCGA ACTCGACCGG CTTTTTGCCG ATTGGGAAAA AGCAACGTCC TGA
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Protein sequence | MFEARNLSLS VGTKELLADS SFRIGDRDRV SLVGMNGTGK STLLKLISGT SSESTIVTEG QFLKSADTSI GYLPQEISFD DDLEKTALQY AMHANIRLFE LSETIAQLEH ELALPDQDHA GEAYHRLIER FTDAMHDFDH HGGYTMRAQA EKMLSGLGFS EADFHKKVKA FSGGWQMRLL ITRLLLQNPT LLLLDEPTNH LDIDSLRWLE NYLQNYEHSC IIVSHDRFFL DKLTTRTLEI AFQRIEEYKG NYSYYEKEKA ARYELMMSRY ANDLKKAAEL KAFVDRFRYK ATKARQAQSR LRQLEKLEQG LQAPEEDLSQ ISFRFPKANP SGREVMRLEG IGKTYTLPDG TPKQVLRNIN LEVLRGDRIA IVGSNGAGKT TFCKILAGEI DFEGKLSTGH NVSLNYFAQH QTENLDTEKT VYKEMLDAAP TSEAQKKIRD ILGCFLFSGS AVEKKIGVLS GGEKSRVALA RILLQASNLL IMDEPTNHLD MRSKEMLIDA LENYDGTLLL VSHDRYFLDS LVNKVIEIKN GGLQLYHGTY AEYLEKAEKA LEEERVLESA RQKAEAAAAK ISKVPQAKPA PAPKKNHRKI ESIEKNIQAL EQRKENLETV MASDEFYKQS PEATKKTLAE YHTLGAELDR LFADWEKATS
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