| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1945 |
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| Symbol | |
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| ID | 6355000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2157615 |
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| End bp | 2158583 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642669543 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001943956 |
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| Protein GI | 189347427 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGCA GAAGTAAGAT GGTTTTCGGT GGAGTGGCAG TACTTCTCGT TACAGGAGTT
GCCGTATTTT TTCTCTTGCG TGGCGGAGGA GCGGAGAAAC AGAGCTTTAC TGAAATTCGC
GTCGAAAGAG GGTATATCAG ATCCGGAGTT TCAACGACGG GAGTTGTCGA ACCGCGCAAC
CGTCTTAAAA TACAGTCCTC CATCGCCGGA AGGATCGAGG ATATTCATGT CGAGGAAGGG
CAGCTTGTTC GGAAAGGCCA GGTGCTTGCC CGTCTCAGTT CCACCGAACG TGCCGCACTG
CTTGATGCGG CAAAACTGCA GGGAGACAAG GAACTTTCCT ACTGGAAAAC CGTCTATCGC
GAAACCGCAG TCATCGCTCC GATCAATGGA CAGATCATTG TACGAAGCGT CGAACCGGGC
CAGACGGTAA CCACCAGCGA CTCGCTGTTC GTCCTCTCTG ACCGGCTTAT CGTCAAGGCA
TATGTAGACG AAACCGATAT CGGGCGCGTA AAAATCGGAC AGAACGCGGT GATCGGTCTT
GACGCCTATC CTGAAATAAA GGTGCACGGA GTGGTCGAAC ATATCTATTA CGAGTCTCAT
TTACAGAATA ACGTGAACAT CTACTATGTC GATGTGATTC CCGAAACCAT TCCCGACGTG
TTCCGTTCGG GTATGAGCGC CAACATCGAT ATTATCGTCA GTGAAAAAAA CAACGCGCTG
CTTCTGCCCT CAAGCGCCCT GCAGAGCAGA AAAGGCAAAA CCGTGGTGCG GCAGAAAAGC
CTCGCCGCCA AAAACGGCGT GATCTATAAA GCGGTTGAAA CCGGCATGCA GGACGACACC
AATATCGAGA TACTTCACGG TCTCAGGGAA AACGCTGTCG TGCTGGTTCA GGACACATCG
TTTGCCCTTC CCGAAAACAA CGGCGGATCA AACCCCTTTA TGCCTCAGCG GAACAGAAGA
AAACAATGA
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| Protein sequence | MISRSKMVFG GVAVLLVTGV AVFFLLRGGG AEKQSFTEIR VERGYIRSGV STTGVVEPRN
RLKIQSSIAG RIEDIHVEEG QLVRKGQVLA RLSSTERAAL LDAAKLQGDK ELSYWKTVYR
ETAVIAPING QIIVRSVEPG QTVTTSDSLF VLSDRLIVKA YVDETDIGRV KIGQNAVIGL
DAYPEIKVHG VVEHIYYESH LQNNVNIYYV DVIPETIPDV FRSGMSANID IIVSEKNNAL
LLPSSALQSR KGKTVVRQKS LAAKNGVIYK AVETGMQDDT NIEILHGLRE NAVVLVQDTS
FALPENNGGS NPFMPQRNRR KQ
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