Gene Clim_1943 details

Gene Information

• Locus tag: Clim_1943
• Symbol: sucC
• ID: 6354998
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 2154043
• End bp: 2155221
• Gene Length: 1179 bp
• Protein Length: 392 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 642669541
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_001943954
• Protein GI: 189347425
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATTC ATGAATATCA AGGCAAAGAT ATCCTGAAAA AATTCGGGGT CAGCGTACCG 
AGAGGTATCG TGGCTTTTTC GCCTGACGAG GCAAAGCAGG CCGCCCAGCA GCTTTTTGAG 
GAACAGGGCA GCCCGGTTGT CGTTGTCAAG GCCCAGATTC ATGCCGGAGG TCGGGGAAAG 
GCCGGGGGCG TTAAACTTGC GAAGTCTCCC GATGAGGCTA TGGAAATTGC ACGGCAGATG 
CTTGGCGCAA CCCTGGTGAC CCATCAGACA GGTCCGGAGG GAAAGCAGGT AAGCCGGCTG 
CTTGTAGAAG AGGGCATGAA CATCGACCGC GAGTTCTATG TGGGCATTAC CCTTGACCGT 
TCCACATCGA GAAATGTACT GATGGTTTCA ACCGAAGGCG GTATGGAAAT CGAAAAGGTC 
GCCGAAGAGA CGCCCGATAA ACTTTTAAAA ATTCAGGTCG ATCCCCTGTA TGGCCTGCAG 
GGATTCCAGG CACGCGAAGC GGCATTTTTC CTTGGCCTCG AGGGGGAACA GTTCAGGAAT 
GCAGTAACGT TTATCATTGC GCTTTACAAC GCCTATATGA CAATCGACGC TTCTCTGGCT 
GAAATCAATC CGCTTGTCGT TACCAAAGAA GGACGGGTGC TGGCTCTCGA TGCTAAAATC 
AATTTCGACG GGAACGCGCT TTTCCGCCAC AAGAATTTTC TCGAGCTGCG CGACACCAAC 
GAAGAAGATC CGTTCGAAGT TGAAGCTTCG AAATCAAATC TCAACTACGT CCGTCTTGAC 
GGAAACGTCG GCTGCATGGT CAACGGCGCC GGCCTTGCCA TGGCAACCAT GGACATGATT 
CAGCTCGCAG GCGGAAGACC TGCAAACTTC CTCGACGTCG GCGGTGGAGC GAGTCCGGAA 
ACCGTTGAGG AGGGCTTTAA AATTATTTTG AGCGACAAGA ATGTCAGAGC GATTCTCGTC 
AATATCTTCG GCGGAATCGT CCGTTGCGAC CGCGTTGCCG GCGGCATTAT TCAGGCCGCC 
CGGAAAATCG GACTCAACCT TCCGGTGATT GTTCGCCTCG AAGGTACCAA TGCGGAAATT 
GCCCAGAAGA TGCTCGATGA ATCCGGGCTG AACCTGATTG CGGCAAACGG CCTGCATGAC 
GCAGCGGCAA AAGTCAACCA GGCGCTTGCC GCCGGCTGA 

 

Protein sequence

MNIHEYQGKD ILKKFGVSVP RGIVAFSPDE AKQAAQQLFE EQGSPVVVVK AQIHAGGRGK 
AGGVKLAKSP DEAMEIARQM LGATLVTHQT GPEGKQVSRL LVEEGMNIDR EFYVGITLDR 
STSRNVLMVS TEGGMEIEKV AEETPDKLLK IQVDPLYGLQ GFQAREAAFF LGLEGEQFRN 
AVTFIIALYN AYMTIDASLA EINPLVVTKE GRVLALDAKI NFDGNALFRH KNFLELRDTN 
EEDPFEVEAS KSNLNYVRLD GNVGCMVNGA GLAMATMDMI QLAGGRPANF LDVGGGASPE 
TVEEGFKIIL SDKNVRAILV NIFGGIVRCD RVAGGIIQAA RKIGLNLPVI VRLEGTNAEI 
AQKMLDESGL NLIAANGLHD AAAKVNQALA AG