Gene Clim_1942 details

Gene Information

• Locus tag: Clim_1942
• ID: 6354997
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: -
• Start bp: 2153461
• End bp: 2153919
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642669540
• Product: CMP/dCMP deaminase zinc-binding
• Protein accession: YP_001943953
• Protein GI: 189347424
• COG category: [F] Nucleotide transport and metabolism; [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0590] Cytosine/adenosine deaminases

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACAATC TGAACTTTTA TATGGAACAG GCCTTCAGGG AAGCGTTGAA AGCCTACGAA 
AAAAAAGAGG TGCCCGTAGG GGCGGTCGTT TTCGACAGTA ACGGCAATAT TGCCGGCAGG 
GGACACAATC AGGTTGAAGC GTTGTCCGAC GCCACGGCGC ACGCCGAAAT GATCGCGCTC 
ACCTCGGCCA TGGCCACGCT CGGCAGCAAA TACCTCGACG CATGCACGCT GGCCGTAACC 
ATGGAACCCT GTCCCATGTG TGCCGGGGCA ATCGTCAACG CAAAGGTCGG GCGAGTCATT 
TTCGGAGCCT ATGATCCGAA AATGGGCGCC TCGGGTACGG TGCTGAACAT AACAGGATGC 
AGGGAACTCA ACCACCAGCC GGAAGTGATC GGAGGCATTA TGGAGAACAA ATGTTCCGAA 
TTGCTCCGCG ATTTTTTTTC GGAGTTGCGC CGCAGGTAA 

 

Protein sequence

MHNLNFYMEQ AFREALKAYE KKEVPVGAVV FDSNGNIAGR GHNQVEALSD ATAHAEMIAL 
TSAMATLGSK YLDACTLAVT MEPCPMCAGA IVNAKVGRVI FGAYDPKMGA SGTVLNITGC 
RELNHQPEVI GGIMENKCSE LLRDFFSELR RR