Gene Clim_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1925 
Symbol 
ID6354979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2128500 
End bp2130851 
Gene Length2352 bp 
Protein Length783 aa 
Translation table11 
GC content57% 
IMG OID642669522 
Producthypothetical protein 
Protein accessionYP_001943936 
Protein GI189347407 
COG category[S] Function unknown 
COG ID[COG4995] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACCC GATCATTCGG CGGTGGCATC AGCGTAATCG TTCCCGAGGG ATTCGACCTG 
TCCCGCTCCA GGGCAAAAAT CCCCGAATGC ACGTTTCCCG ACAGATCAAC AGCAGCGTCC
TTCCATGGCT GTTCCGAAAC TCTCGATCCG CAACCCCTCG AGCAGCAGGA TATCGAACAC
TGCCTCACGC TTCTGGTTCG CTCCCTGCAC CACCGCGCCG CAGTCGGCGC TGTCGCAGAG
CTGCGGATGG AGCTCGCTGA AGGTGAAGAT GCGCTGCTGC TGCAGGAGGC TGACGGGGTT
TCATTCTGGT CTCGACCCGC AGAATACCGT ACCTCCACCC GAAAATATCA ATCGGGACAG
GCGGCACTCC CTCATCGAAC CGCGCTTTTT CATGTCGATC TCGACTCGCT GTCCCGCAGC
GGCACGAAGT CCTCCTCTCT GTTCAGGCTC TTCCTGTTCC GCCTTTGTTC AGTAAAATCC
CATGCTGTCG ATATAGGCAT TTCACTGCCG CATCTCAAAT CCCGCATCGT TTTTCCGGCG
ATTGACCCTG ACGATTTCAT CTCCGAAAAA CTCTCGCGTT CCATGCTTTC CTCCAGAGGA
ATCGACCTGG ATGAAGCCCA TACGGCCTGT GAACCCTCGA ATGAAGACAA CTCCTTTATT
CCCGGCATCG AATCATGCAT CTCGTTCGCG GAACCTCCTG AAACTTCCGA AGCCATGCCG
CCGCCATCCA TGGCAGAACC TGAGTTCTCT CCATCTCTGC CGCCGCCCAC CATGGCCGAA
TCGGAGCCCT CTCCGCCTCC ACCCCCGAGC GCCGCGAGGC CCGAAACCGT CACCGCCTAT
CTCCATGCCG AAATGGACGC CGAAGTCGTG CTGAACCACG CAGCGACGCT CAGTGTGTTC
GTATCGAGGG AAGAAATCGA ACTGCAAAAC GGCAGCGTAT CGAAAACCGG AAAAGGAGAG
TTCGAAACCG GCAGAAAACT GATTGTCGAA CTGATCGTGC AATCGAAATT CCTCATGCTC
GGCGATGAAA CCGGATACCG TGAAATCGAT CTTCCCGACC CTGAAAATCC GGTAGAACTG
CTTTTCAATC TCAAGGCTTC CGAAGAAGGC GAAGGCGTCA TCCTCGTTCT CGCCCGTCAG
GGCCAGATCC CTGTCGTCAG GCTGGAGCTC AAACCCTCCG TCGTCGGCGC GAAACCCGGC
GCTTCCGGAA AAATCCGCGA CGCCCGGCAG GCCCAGGAGC CTCCGGTACT GAAAAAACCG
CTGCACCAGC TCTGGATACG TGAGGTGAAA ACCGAAAACG GACTCTGCTA CAACTACCAG
ATCTACTCGC CGGAACTGCA GATTCAGCAG TACACCGAAT CGGTGCCCTT CAAAGGCGAC
CGCGCGGCGT ATATTCGCGA TCTCTATACC TTCATCGAGG AAAAATGGGT GGCAAGCGGT
CGGAACAGCA ACGATTTTCT GCAGGAACTT CGCGCCTTCG GAGCCGATCT GTTCGATCAG
CTCATACCGC TTCCCCTGCA GGAACTCCTC TGGAAGCACC GGAACCACTT CAGCGGCATT
CAGGTCATCT CCTCCGAGCC CTTCATTCCC TGGGAACTGG TTCATCTTAA AAACCCGACA
AAAAAAGGCA TGCCCAAACA GGAGTGCTTT CTCGGACAGC TCGGCATAAC CCGCTGGCTC
ATGGGAGCCG GAAAAAACGG CTGGCCTCCC GATCGCATAA CGGTGCGCAA GGACGGGTGC
CGATACGTCA TTCCCGACTA CCATCAAACA AGCTTTTCTC TTCCTGCAGC TGCGGCGGAA
GCCGGTTTTC TCGAAAAGCA CTTCCACGCA ACGCGGGTTC CTGCCGAACT GCAGACGGTG
CGCGACCTTA TCGCCGAGCC CGGATCGTTC GACCTGCTGC ACTTTGCCTG CCATGGCCAA
TCCGATCAGG AAAGCATCGG CCACTCGGCC CTGCTGCTCA ACGGCCTTGC GGGGCGGAAC
CCCTACGAAC CTGAACGCTT TTCCGAAACC CTTGCGGCAA GTTTCTCCGA TCTCGAGGTA
CCGGACGGCA ACCGTCCGCT TATTACCGTG AACGCCTGTC AGACCGGACG TTCGGGTTAC
AAACTGACCG GTATCGGCGG TTTCGCCAAC GCATTCCTCA ACGGCGGGGC AGGGGCATTT
ATCGGAGCGC TCTGGTCAGT AGGCGACGCT CCCGCCCAAA CCTTCATCGA AACGCTCTAC
ACGGCATTGA TGGATGGCAG CAATCTGTCG GAAGCGGCCA TCAAGGCAAG AAAAGCCGCA
AGAAAAGCCG GAGATGCAAC CTGGCTGGCC TATGTCGTGT ACGGTCATCC GCATCTTGTT
CTCGAGCGAT AA
 
Protein sequence
MKTRSFGGGI SVIVPEGFDL SRSRAKIPEC TFPDRSTAAS FHGCSETLDP QPLEQQDIEH 
CLTLLVRSLH HRAAVGAVAE LRMELAEGED ALLLQEADGV SFWSRPAEYR TSTRKYQSGQ
AALPHRTALF HVDLDSLSRS GTKSSSLFRL FLFRLCSVKS HAVDIGISLP HLKSRIVFPA
IDPDDFISEK LSRSMLSSRG IDLDEAHTAC EPSNEDNSFI PGIESCISFA EPPETSEAMP
PPSMAEPEFS PSLPPPTMAE SEPSPPPPPS AARPETVTAY LHAEMDAEVV LNHAATLSVF
VSREEIELQN GSVSKTGKGE FETGRKLIVE LIVQSKFLML GDETGYREID LPDPENPVEL
LFNLKASEEG EGVILVLARQ GQIPVVRLEL KPSVVGAKPG ASGKIRDARQ AQEPPVLKKP
LHQLWIREVK TENGLCYNYQ IYSPELQIQQ YTESVPFKGD RAAYIRDLYT FIEEKWVASG
RNSNDFLQEL RAFGADLFDQ LIPLPLQELL WKHRNHFSGI QVISSEPFIP WELVHLKNPT
KKGMPKQECF LGQLGITRWL MGAGKNGWPP DRITVRKDGC RYVIPDYHQT SFSLPAAAAE
AGFLEKHFHA TRVPAELQTV RDLIAEPGSF DLLHFACHGQ SDQESIGHSA LLLNGLAGRN
PYEPERFSET LAASFSDLEV PDGNRPLITV NACQTGRSGY KLTGIGGFAN AFLNGGAGAF
IGALWSVGDA PAQTFIETLY TALMDGSNLS EAAIKARKAA RKAGDATWLA YVVYGHPHLV
LER