Gene Clim_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1897 
Symbol 
ID6354951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp2100247 
End bp2101164 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content46% 
IMG OID642669495 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001943909 
Protein GI189347380 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.58002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAG TTCTAACATC CCCCTCCTCT TTCGGAGAAA TCGACCCAAA ACCTTTCGAT 
ATACTTAAAG AAAACGGCTA TGAAGTGATC AACAACCCTT TCGGTCGCAA ACTCACCGAA 
GACGAGGTGA TTGAGATCGC CAAAGAGTGT GTAGGCATTG TAGCCGGTGT GGAGCCGCTC 
AACCAAAAGG TCATGGACAA CCTTCCCAAC CTCAGGTGCA TCAGCCGGGT AGGTGTGGGT 
ATGGACAGTG TAGACCTAGA TTATGCCAAG CAAAAAGGCA TTGTAGTAAC AAATACTCCA 
GATGGTCCTA CCCGTAGCGT GGCTGAACTG ACTATAGCCA TGACCTTGGC TTTGCTTAGG 
AAAGTGCCTC AGGCTCATAT GAATATAAAG CAGGGCGTCT GGAAAAAAGA GATCGGTAAC 
CTGATGTATG AAAAGAAAGT TGGTCTGATT GGACTAGGTA AGATCGGTAA ACTGGCTGCA 
AGCCAGTTTC AGGCCTTTGG TTGTAGCGTG ATGGCTTTTG ATCTGTATCC AGAAACCGCT 
TGGGCCGAGG CAAATGATGT TGAAATAGTG GATATGGAAA AACTCTTGGC AGAATCGGAT 
ATCATCAGCC TGCACATTCC TAAACCCGAT ACAGAACTGA TCGGAGCCGC TGAACTGGAA 
AGCATGAAAG AAGGCAGCTT CCTGATCAAC ATTGCCCGGG ATGGTATTGT GAATGAGGGC 
GCTTTATATG AAGCACTGAA ATCTAATAAA CTGGCTGGTG CAGCGATTGA TGTATTTAGT 
AAGGAACCCT ACGATGGGAG CCTGAAAGAG CTGGATAACA TCGTCCTGAC ACCGCACATT 
GGCTCTTATG CCAAAGAAGG TAAACTGCAG ATGGAGATCG ATGCGGTTAA TAACCTCTTG 
AACGCTTTAA GTTCTTAG
 
Protein sequence
MAKVLTSPSS FGEIDPKPFD ILKENGYEVI NNPFGRKLTE DEVIEIAKEC VGIVAGVEPL 
NQKVMDNLPN LRCISRVGVG MDSVDLDYAK QKGIVVTNTP DGPTRSVAEL TIAMTLALLR 
KVPQAHMNIK QGVWKKEIGN LMYEKKVGLI GLGKIGKLAA SQFQAFGCSV MAFDLYPETA 
WAEANDVEIV DMEKLLAESD IISLHIPKPD TELIGAAELE SMKEGSFLIN IARDGIVNEG 
ALYEALKSNK LAGAAIDVFS KEPYDGSLKE LDNIVLTPHI GSYAKEGKLQ MEIDAVNNLL 
NALSS