Gene Clim_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1883 
Symbol 
ID6355224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp2088452 
End bp2089129 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content46% 
IMG OID642669483 
Productacylneuraminate cytidylyltransferase 
Protein accessionYP_001943897 
Protein GI189347368 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1083] CMP-N-acetylneuraminic acid synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATTC CAAAAATTAC TGCGCTCGTA CCCATGAAAG GGCATTCAGA AAGAGTTCCG 
AACAAAAACC TTCGTCCGGT TGCCGGAAAA CCATGCTTTC ACTGGATCAT TGAATCGCTG 
GAAAGGAGTC CATACATCGG AGAGATCGTC ATAAACACGG ACTCAGATGA GATTGCTGAA 
AGCGCCAAGA AGAACTTTCA GGTGACTATT TTGGAACGTC CAGATTACCT GCTCGGGGAC 
ATGGTAAGTA TCCAGCCATT GATTGAATAC GACCTGTCCA TGACAGAGGG TGATTATTAT 
TTGCAGACTC ACAGTACCAA TCCGCTGGTC ACCACCGAAA CAATCAACAA TTCCATCAAG 
ACTTTCTTCA ATCAAAAAGA GCACGATGCT TTGTTCACTG TTACTCCCAT TAAGACCCGC 
TTCTACAGAG CAGACGGTTC GGGTGTCAAC CATGATCCCA GACACTTGAT CAGGACCCAG 
GATCTGGACC CCATTTTCGA GGAAAACTCC TGTTTGTACA TTTTTTCCAA AAAAACCAAT 
GAACAGATCC GTAACCGGTT GGGAGCCAAC CCCATGATGT ATCCAATGGA TCATCTGGAG 
GCGGTGGATA TCGACGATAT GCACGATCTA CTTTGGGCTG AATTCCTGCT CAACCAACGT 
CTGACCAGAA AACTGTAA
 
Protein sequence
MEIPKITALV PMKGHSERVP NKNLRPVAGK PCFHWIIESL ERSPYIGEIV INTDSDEIAE 
SAKKNFQVTI LERPDYLLGD MVSIQPLIEY DLSMTEGDYY LQTHSTNPLV TTETINNSIK 
TFFNQKEHDA LFTVTPIKTR FYRADGSGVN HDPRHLIRTQ DLDPIFEENS CLYIFSKKTN 
EQIRNRLGAN PMMYPMDHLE AVDIDDMHDL LWAEFLLNQR LTRKL