Gene Clim_1871 details

Gene Information

• Locus tag: Clim_1871
• ID: 6355212
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: -
• Start bp: 2058203
• End bp: 2063770
• Gene Length: 5568 bp
• Protein Length: 1855 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642669472
• Product: Hemolysin-type calcium-binding region
• Protein accession: YP_001943886
• Protein GI: 189347357

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0127507
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAACT CCATTTATTT TTTTGATAGT CGTGTTACTG ATATCGAAAC GCTTATCGAA 
GCGCTTCCTT CAGGTTCCTC GTATGTCATT CTCGATTCCG ACAAGGATGG TATGCGTCAG 
ATTGCCGCTG CGCTTGCCGG CAAAACGGGT ATCGATTCCA TTCAGCTCGT TTCTTACGGA 
TCGAGCGGAA CCGTGATGCT CGGGTCAACC GTGCTGACTG CATCGAACCT TGCGAAGTAC 
CGCAATGAAC TGGCCTCGAT CGGCAGTTCG CTTTCTGCGG ACGGCGATAT TCTGCTCTAT 
GGATGCAATG TCGGGGAGGG TGTAGCCGGC AAGGTTTTCG TTGACCGTCT TGCCAGCTAT 
ACCGGCGCCG ATGTCGCCGC TTCGGTCAAT AAGACAGGGA AGGGCGGAGA CTGGGTGCTG 
GAGGTTTCTT CCGGGTCGAT CGAGGCCGAC AGCAGCGTGT TCGCTGCAGC GGGATATGAG 
TATTCGCTCG ATATTACCGG TACTCCGGGT AATGATGCGC TTACGGGAAC ATCTTCCGCT 
GATACCATGT ATGGTCTTGC CGGTAACGAT ACGCTGAACG GTGCCGGAGG GAACGACTCG 
ATCGATGGAG GCGAAGGTAA TGACAGCCTG AACGGATCTA CAGGAGATGA TACGTTGATC 
GGCGGTTCCG GGAACGATAC GCTGAATGGG GGAAGCGGGA ATGATTCGAT GGTCGGCGGC 
TCCGGGAACG ATATCTATTA TGTTGACAGC CTGGGTGATG GTGTTCTGGA AGGGTTGGAT 
GAAGGGACGG ATCGGGTTTA TTCGTCATTG GCCGCTTACA CATTGTCTGA CAATGTTGAG 
AACCTGAATC TGCAGGGAGC AGCGTTCCAT GGTACCGGTA ATGATCTCGA TAACTCGATA 
GTCGGAAATA ACAGTAGTAA TTCTCTCGAT GGCGGTGAAG GTAATGACAG CCTGAGCGGA 
TCCGCAGGAG ATGATACGTT GATCGGCGGT CCGGGCCTGG GCAATGATAC GCTGAATGGG 
GGAAGCGGGA GTGATTCGAT GGTCGGCGGC TCCGGGAACG ACACCTATTA TATAGACAGC 
GGGACTGACG AAATTGTGGA GAGTTTAGAT GGAGGAACTG ACCGTGTTTA TTCTTCATTG 
ATATCGTACG ATATGGAAGC GAATGTCGAG AACCTGATAT TGCAGGATGG CGATGCTTTA 
TTCGGTTACG GTAACCTGCT TGACAATTCG ATAACCGGCA ATGACTCTGA TAATGTGCTG 
TATGGAGGAG ACGGCAATGA TTCTCTGAAT GGAGGAGATG GCAATGATTC GCTCAATGGT 
GGTAATCATA ACGATTCGCT GAATGGAGGG AATGGCAACG ATCTCCTTGA TGGAGGTGAG 
GGCAATGATA CGCTTATTGG TGGGACCGGA ACAGGTAGCG GAGACGATAC TCTTTATGGT 
TATGCCGGAA ATGATTCCCT GACGGGATAT GACGGCGATG ACAGCCTTTT CGGTGGTGAG 
GAAAATGACA CCTTGTCGGG AGGAAACGGT AATGATATGC TCGATGGTGG AATGGGTATT 
GATTCAATGG TTGGTGGTGC CGGTAACGAC ACCTACTATG TAGATCATGC GAATGATCGT 
GTGAACGAAA CCCTGGTAGT GAACGGTACG GCGGACCATG TCTATTCCTC ATTGAGCGCC 
TATACACTCG GGAACAATGT CGAGAATCTT ACCCTGATTG AAGGTGCTGG AGATATAAAC 
GGAACCGGTA ATACACTTGA CAATGTCATA ACCGGCAACA GCGGAAATAA TACGCTTTCA 
GGCGGCGCCG GTAACGATAC CCTTAATGGC GGCGCCGGTA TTGATTCAAT GGCAGGGGGT 
ACCGGTAACG ATACATATTA TGTAAATGAT CCGGGTGATG TCGTTACCGA GACAAGTGGC 
GGCGGTACGG CTGACCATGT GTATGCGTCT TTTTCATATA CGCTTACGGA TAATTCATAC 
ATCGAAAATC TGACATTGCA GGAAGGGGCC GGAGATATTG TAGGGATCGG TAACGCGTCG 
GATAATGTGT TAACCGGCAG CAACGGAAAT AATACGCTGG ATGGCGCTCT TGGCAACGAC 
ACACTGGACG GCGGAGCGGG TAGCGATTAT CTTGATGGCG GAGCCGGCGA CGACTGGCTG 
AGCGACGAGG ATGCGGGAGG CGGCAGCAAC ACGCTGGACG GCGGAGACGG CAACGACACC 
GTGGATGCCG GCTACGGCAC GCAATCGGTG ACAGGCGGCG CCGGCGACGA TATTCTCTCG 
GTCTATGAAG CGACAGGCGT GCTGGACGGC GGAGATGGAG CGGACGTCCT TGACGGCGAA 
TACGGCACAT ACACGATGAC AGGCGGGTCG GGCAATGACG ATCTGTACGG CTACTACTTC 
GGCGGCACCA TGTCGGGCGG CGCAGACGAC GATAACATGT ACGTGGGTTA TGGAAGCGGC 
ACGGTAACGA TGACGGGCGA TGGCGGCAAC GACACGCTGG AGGGCCAGAA CTCGACAGCG 
GTACTGTCAG GCGACCTTGG CAACGACGTT GTAGATGCAC GTCACGGCAC CTATACGCTG 
ACTGGCGGCG AAGGTGACGA TGAAGTATCG GCAGACGATG CGACGGGCGT GCTGGAAGGG 
GGCAGCGGCA ACGACGTTGT AGACGGCGAA TACGGCACCT ATACGATGAC AGGCGGGACG 
GGCAATGACG AGATGTACGG CTACTACTTC AGCGGCAACA TGTCGGGCAA TGAAGACGAC 
GACCTGATGT ATGTGGGGTA TGGCGAAGGC GCGTCGGTGA CGATGTCGGG AGGCAGCGGC 
AACGACACGC TGATAGGCGA CCTTGGCGGC ACGTACCAGA TGGCAGGCGA TGCCGGCAAT 
GACGAACTGT ACGGCTACAC GGGCAACGAC ACGCTGGACG GCGGAGCGGG TAGCGATTCT 
CTCGATGGCG GAGCCGGCAA CGACTGGCTG AGCGACGAGG ATGCGGGAGG CGGCAGCAAC 
ACGCTGGAAG GCGGAGACGG CAACGACACC GTGGATGCCG GCTACGGCAC GCAATCGGTG 
ACAGGCGGCG CCGGCGACGA TATTCTCTCG GTCTATGAAG CGACAGGCGT GCTGGACGGC 
GGAGATGGAG CGGACGTCCT TGACGGCGAA TACGGCACAT ACACGATGAC AGGCGGGTCG 
GGCAATGACG ATCTGTACGG CTACTACTTC GGCGGCACCA TGTCGGGCGG CGCAGACGAC 
GATAACATGT ACGTGGGTTA TGGAAGCGGC ACGGTAACGA TGACGGGCGA TGGCGGCAAC 
GACACGCTGG AGGGTCAGAA CTCGACAGCG GTACTGTCGG GAGACGCAGG AGACGACCTG 
GTGGATGCAC GTCACGGCAC CTATACGCTG ACTGGCGGCG AAGGTGACGA TGAAGTATCG 
GCAGACGATG CGACGGGCGT GCTGGAAGGG GGCAGCGGCA ACGACGTTGT AGACGGCGAA 
TACGGCACCT ATACGATGAC AGGCGGGACG GGCAATGACG AGATGTACGG CTACTACTTC 
AGCGGCAACA TGTCGGGCAA TGAAGACGAC GACCTGATGT ATCTGGGGTA TGGCGAAGGC 
ACGTCGGTGA CGATGTCGGG AGACAGCGGC AACGACACGC TGATAGGCGA CCTTGCCGGC 
ACGTACCAGA TGGCAGGCGA CGCCGGCAAT GACGAACTGT ACGGCGACAC GGGCAACGAC 
ACACTGGACG GCGGAGCGGG TAGCGATTAT CTTGATGGCG GAGCCGGCGA CGACTGGCTG 
AGCGACGAGG ATGCGGAAGG CGGCAGCAAC ACGCTGGACG GCGGAGACGG CAACGACACC 
GTGGATGCCG GCTACGGCAC GCAATCGGTG ACAGGCGGCG CCGGCGACGA TATTCTCTCG 
GTCTATGAAG CGACAGGCGT GCTGGACGGC GGAGATGGAG CGGACGTCCT TGACGGCGAA 
TACGGCACAT ACACGATGAC AGGCGGGTCG GGCAATGACG ATCTGTACGG CTACTACTTC 
GGCGGCACCA TGTCGGGCGG CGCAGACGAC GATAACATGT ACGTTGGTTA TGGAAGCGGC 
ACGGTAACGA TGACGGGCGA TGGCGGCAAC GACACGCTGG AGGGCCAGAA CTCGACAGCG 
GTACTGTCAG GCGACCTTGG CAACGACGTT GTAGATGCAC GTCATGGCAC CTATACGCTG 
ACGGGCGGCG AAGGTGACGA TGAAGTATCG GCAGACGATG CGACGGGCGT GCTGGAAGGG 
GGCAGCGGCA ACGACGTTGT AGACGGCGAA TACGGCACCT ATACGATGAC AGGCGGGACG 
GGCAATGACG AGATGTACGG CTACTACTTC AGCGGCAGCA TGTCGGGCAA TGAAGATAAC 
GACAACATGT ATGTTGGCTT TGGCGAAGGC GCGTCGGTGA CGATGTCGGG AGGCAGCGGC 
AACGACACCA TGCTGGGCGA TCTGGGAGGT ACGTACCTGA TGGCGGGCGA TGAAGGCAAT 
GACGAACTGT ACGGCTACAC GGGCAACGAC ACGCTGGACG GCGGAGCGGG TAACGACCTT 
GTAGCAGGAG CATCAGGTAA CGATTTGCTT TACGGCAATG AGGGCGATGA TTCGGTTTAT 
GGCGGTTTTG GCATCAATAC GCTGTATGGA GGCTCCGGCA ATGACTCTGT TGATGGTGGA 
GAAATGCAGG ATTTTGCTTT TGGTGAGGAT GGTGATGATA CAATCAGAGG ATTGTATGGC 
AATGATGTGA TAGACGGAGG AGCAGGAAAT GATCTTCTGT ATGGTGGGGA TAACTACTGG 
CAGAATTCTT ACGATGGAAA CGATACGATA TCGGGTGGAG CCGGTAATGA TACCATTGAT 
GGCGAAGCTG GAGATGATTT TCTGAATGGT GGTTCTGGGG ACGATAATAT GTTTGGAGGA 
TATGGTGTGA TCTGGGGTTA CAATACCATT GAGTTCAGCG GTAACGATAC CATGTTTGGT 
GAAGACGGCA ATGATATACT CGATGGCGGT CTTGATAATG ACAGTCTCGA TGGCGGAGCC 
GGCAATGATT ATCTGGAAGG CGGAGCAGGA GACGATTTCC TCCGGGATCT GAGCGGCAAT 
AATACGCTGA TGGGTGGAGC CGGCAACGAT TATCTGGATG GTGGAGCCGA AAATGATTAT 
CTGGACGGCG GTGAAGGTGC AGATACGCTC TTGGGCTGGG ATGGCAATGA TGTGCTGCTG 
TTCGACGAGA ACGATGCAGT CATCGATGGC GGTAATGGCA TCGATACTTT GATTCTCGGT 
ACTGATGCGA GTTACTCGTT CAGTGATATC GTGAGCGACG TAAGTGTTCT GCACATGGAA 
GCCATCGATC TGACTGCCAA TGGCAATCAT ACGCTCAGCA ACGTAACTGC CGCAGATGTT 
GCAGCGTACG CTAATGGTAT CTATATTCTT GGAGATAGCG GCGATACGCT GACGTCAACG 
GATACGTGGT CTGATACGGG TGATCAGATT GTAAACGGGA TCACGTTTGA TATCTATACA 
AGCGGTTCAG CAACGGTGAA CATTCAGCGG GGGATCACTC TTGCGTGA 

 

Protein sequence

MSNSIYFFDS RVTDIETLIE ALPSGSSYVI LDSDKDGMRQ IAAALAGKTG IDSIQLVSYG 
SSGTVMLGST VLTASNLAKY RNELASIGSS LSADGDILLY GCNVGEGVAG KVFVDRLASY 
TGADVAASVN KTGKGGDWVL EVSSGSIEAD SSVFAAAGYE YSLDITGTPG NDALTGTSSA 
DTMYGLAGND TLNGAGGNDS IDGGEGNDSL NGSTGDDTLI GGSGNDTLNG GSGNDSMVGG 
SGNDIYYVDS LGDGVLEGLD EGTDRVYSSL AAYTLSDNVE NLNLQGAAFH GTGNDLDNSI 
VGNNSSNSLD GGEGNDSLSG SAGDDTLIGG PGLGNDTLNG GSGSDSMVGG SGNDTYYIDS 
GTDEIVESLD GGTDRVYSSL ISYDMEANVE NLILQDGDAL FGYGNLLDNS ITGNDSDNVL 
YGGDGNDSLN GGDGNDSLNG GNHNDSLNGG NGNDLLDGGE GNDTLIGGTG TGSGDDTLYG 
YAGNDSLTGY DGDDSLFGGE ENDTLSGGNG NDMLDGGMGI DSMVGGAGND TYYVDHANDR 
VNETLVVNGT ADHVYSSLSA YTLGNNVENL TLIEGAGDIN GTGNTLDNVI TGNSGNNTLS 
GGAGNDTLNG GAGIDSMAGG TGNDTYYVND PGDVVTETSG GGTADHVYAS FSYTLTDNSY 
IENLTLQEGA GDIVGIGNAS DNVLTGSNGN NTLDGALGND TLDGGAGSDY LDGGAGDDWL 
SDEDAGGGSN TLDGGDGNDT VDAGYGTQSV TGGAGDDILS VYEATGVLDG GDGADVLDGE 
YGTYTMTGGS GNDDLYGYYF GGTMSGGADD DNMYVGYGSG TVTMTGDGGN DTLEGQNSTA 
VLSGDLGNDV VDARHGTYTL TGGEGDDEVS ADDATGVLEG GSGNDVVDGE YGTYTMTGGT 
GNDEMYGYYF SGNMSGNEDD DLMYVGYGEG ASVTMSGGSG NDTLIGDLGG TYQMAGDAGN 
DELYGYTGND TLDGGAGSDS LDGGAGNDWL SDEDAGGGSN TLEGGDGNDT VDAGYGTQSV 
TGGAGDDILS VYEATGVLDG GDGADVLDGE YGTYTMTGGS GNDDLYGYYF GGTMSGGADD 
DNMYVGYGSG TVTMTGDGGN DTLEGQNSTA VLSGDAGDDL VDARHGTYTL TGGEGDDEVS 
ADDATGVLEG GSGNDVVDGE YGTYTMTGGT GNDEMYGYYF SGNMSGNEDD DLMYLGYGEG 
TSVTMSGDSG NDTLIGDLAG TYQMAGDAGN DELYGDTGND TLDGGAGSDY LDGGAGDDWL 
SDEDAEGGSN TLDGGDGNDT VDAGYGTQSV TGGAGDDILS VYEATGVLDG GDGADVLDGE 
YGTYTMTGGS GNDDLYGYYF GGTMSGGADD DNMYVGYGSG TVTMTGDGGN DTLEGQNSTA 
VLSGDLGNDV VDARHGTYTL TGGEGDDEVS ADDATGVLEG GSGNDVVDGE YGTYTMTGGT 
GNDEMYGYYF SGSMSGNEDN DNMYVGFGEG ASVTMSGGSG NDTMLGDLGG TYLMAGDEGN 
DELYGYTGND TLDGGAGNDL VAGASGNDLL YGNEGDDSVY GGFGINTLYG GSGNDSVDGG 
EMQDFAFGED GDDTIRGLYG NDVIDGGAGN DLLYGGDNYW QNSYDGNDTI SGGAGNDTID 
GEAGDDFLNG GSGDDNMFGG YGVIWGYNTI EFSGNDTMFG EDGNDILDGG LDNDSLDGGA 
GNDYLEGGAG DDFLRDLSGN NTLMGGAGND YLDGGAENDY LDGGEGADTL LGWDGNDVLL 
FDENDAVIDG GNGIDTLILG TDASYSFSDI VSDVSVLHME AIDLTANGNH TLSNVTAADV 
AAYANGIYIL GDSGDTLTST DTWSDTGDQI VNGITFDIYT SGSATVNIQR GITLA