| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1842 |
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| Symbol | |
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| ID | 6355183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 2019415 |
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| End bp | 2020554 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642669446 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001943860 |
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| Protein GI | 189347331 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.185865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTACT ACAGCAGCGC CACAGCCCGA AGAAAACACT CGACACGCAC TGCCCGTCCC
CTGGTGATCA TCTGCGCCGC CATGCACCTG CTGCTCCTGG CCGCCTGCGG CAGCATATCT
CCGAAAGAAA CCACACAATA CGCTCCTCCG GAAAAAGAAT TCAAGGCAGA CATTCCGAAA
AAAACGCAGG AATTCGCCAA ACCCTCGACC ATAAGAGATC TCACCCCGAT CGAACAGTTC
AGTTACCGGC TCGGCCCTGG AGACATCCTC AGCGTGCAGG TATGGAGAAG ACCGGAGCTT
TCACAAGAAA ACATCATGGT CTCGCCCGAC GGCAACATCG CCATTCCGAG AATCGGCAAC
ATGAACGTGC TCAACCGAAC ACCGGCCGAA ATACAAAAAC TTATCACCGC CCGGCTCGAA
GTGCTCTACA TCAGGCCGGA AATAACCGTT CGAGTCCAGG AATTTCACAA CAATAAAGCT
TTCGTCCTGG GACGAGTCAC CAAACCCGGC GTCGTGAACT TCCCCGGCAG AGGCACCCTG
CTCGAAGCGC TCGCACTCGC CGGCGGACTA CCCTATCAGG GTAAAGAAAC CTTCCTCACC
AAATGCGCCA TCATCCGGGG CAACGATATC GTCATATGGA TCGACCTGCA GGATCTCCTC
AAAAACGGAA ATATGGCGCT CAACGCATCC ATCATGAACA ACGACGTCAT CTTCATTCCC
GAAGCTGAAG ATGAAATGAT CTACGTCATG GGAGAGGTCA TCACCCCCGG TGCCATACAG
CTGAAAAGCA GCATGAACGT ACTTAAAGCC ATCATGCTGG CCGGGGGCAT GAACAAGCAC
GCAAACCCCG AAAAAATCTT CATCATCCGC CAGCAGGACC TCAAAGGAAA CGTCATCAGG
GTAAACCTGA AAAATCTGCT CGAAAAGGGC GACTTCGCCA AAAACTATAC CCTTCTGCCT
GAAGACATCG TCTTCGTCAG CCCGAGCGGC ATGGCAAAAT TCAACTACAC CCTCGAAAAA
CTCATCCCGG CGCTGCAGGT GCTCAACCTC GGTATCGACA ACTTCGAATC ATTCGGCCTC
ATGCAGGAAT TGCGCAGAAA GCTCTGGGGA CAGGAAGGTT TCGTCAATTC CAGCGAATGA
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| Protein sequence | MQYYSSATAR RKHSTRTARP LVIICAAMHL LLLAACGSIS PKETTQYAPP EKEFKADIPK
KTQEFAKPST IRDLTPIEQF SYRLGPGDIL SVQVWRRPEL SQENIMVSPD GNIAIPRIGN
MNVLNRTPAE IQKLITARLE VLYIRPEITV RVQEFHNNKA FVLGRVTKPG VVNFPGRGTL
LEALALAGGL PYQGKETFLT KCAIIRGNDI VIWIDLQDLL KNGNMALNAS IMNNDVIFIP
EAEDEMIYVM GEVITPGAIQ LKSSMNVLKA IMLAGGMNKH ANPEKIFIIR QQDLKGNVIR
VNLKNLLEKG DFAKNYTLLP EDIVFVSPSG MAKFNYTLEK LIPALQVLNL GIDNFESFGL
MQELRRKLWG QEGFVNSSE
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