Gene Clim_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1836 
Symbol 
ID6355177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2015258 
End bp2015611 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content56% 
IMG OID642669440 
Productanti-sigma-factor antagonist 
Protein accessionYP_001943854 
Protein GI189347325 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTCC GGCTCGAAAC ACAAAACGGC ATCACCATCG GCATAGCCGA ACTCGACGAA 
CGGCTCGACG CAGAGAACAG CAAAGCACTC CAGAAAGCCT GCGGCGACTG GCAACAGCAA
ACCCCGTTCC TCGTCTTCGA CTGCACGAAA CTCGACTTCA TCGACAGCAG CGGTCTCGGC
GCCATCGTCA GCTGCCTGCG CCGTTCGCTC GAAAAAAACG GCGACCTCAA GCTCGCCGGG
CTCAACGCCA AAGTCTCCAT GGTTTTTGAA CTTACAAAAG CCAAAAAGCT CTTCTCCATC
TTTTCAAACG CAAGCGATGC CGCTGCCTCC TTTGCGGTAT CCCGGCAACC ATAA
 
Protein sequence
MAFRLETQNG ITIGIAELDE RLDAENSKAL QKACGDWQQQ TPFLVFDCTK LDFIDSSGLG 
AIVSCLRRSL EKNGDLKLAG LNAKVSMVFE LTKAKKLFSI FSNASDAAAS FAVSRQP