Gene Clim_1828 details

Gene Information

• Locus tag: Clim_1828
• ID: 6355168
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: -
• Start bp: 2004269
• End bp: 2004796
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 642669431
• Product: Tetratricopeptide TPR_2 repeat protein
• Protein accession: YP_001943846
• Protein GI: 189347317

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATGT TGTCCAGGTT GTTTTTTCCC GTAATTGTTG CCCTTGTATC TGTTTTTTTC 
TTCGGGACGG CCGAAGCCGG TTCGCCGAAG AAAATGGTGA AGCAGGGTGA GGCATATTAT 
GCCCTTGGAC GTTTCAATGA GGCTGTGGCG GAGTTCAATC TTGCCATAGC AGAGGACAGC 
AGGTATCAGC AGGCTTATTA TGCAAGGGGC AAGGCGTTCT ATGAACAGCA GAAGTTTCGC 
GAGGCGATTG CTGATTACGA CAAGGCTATT GAGCTGAAAA ATGATTGTGC GAGAGCGTTT 
TATCATCGCG GGCTTGCCTG GGAGGCTCTG CAGGAGTACA CCAGGGCTGC GGCCGATTAC 
GACAGCGCAA TTGCCGTTCG TCATGAGTAC GAAAAGGCGT TGTTTGCGCG GGGAGCACTC 
AGGTATAAGC TCGATGACCG GAGCGGGGCG CTCGACGATA TGAAAAGAGC GGCAGCTTTG 
GGCAGTACAA AGGCTTCGGA GTGGCTGTCG GAACAGGGTA CACGCTGA 

 

Protein sequence

MNMLSRLFFP VIVALVSVFF FGTAEAGSPK KMVKQGEAYY ALGRFNEAVA EFNLAIAEDS 
RYQQAYYARG KAFYEQQKFR EAIADYDKAI ELKNDCARAF YHRGLAWEAL QEYTRAAADY 
DSAIAVRHEY EKALFARGAL RYKLDDRSGA LDDMKRAAAL GSTKASEWLS EQGTR