Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1820 |
Symbol | |
ID | 6355160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1996357 |
End bp | 1997088 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642669423 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001943838 |
Protein GI | 189347309 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACATA TCATCCTTAT CACCGGCGCC GGCAAAGGTA TCGGAAAAGC AATCGCCCTT GAATTTGCCC GATACGCCGA GCGAAACCCA TCATTCGAGC CGGTACTGGT ACTCGCATCG AGAACCCCCG GAGATCTTGA AGCGACTGCA GCCGAGTGCC GGAACTCAGG AGCGGAAACC GATTGTATAA CAACGGACAT CGCCGATGCC GCAAATGCCC TGCATCTGGG TGAAACGGTC GTTGAGAGGT ACGGAACTGT CGATTGTCTG GTCAACAATG CAGGCGTAGG GCGTTTCAAA CCCTTCGCCG AGCTCACCGA AGAGGATTTT GACTACACCG TCGCAACCAA CCTCAAAGGC ACCTTTTTTC TCACCCAGAA ACTTTTCCCT GTTATGGAAA AGCAGAAAAA AGGACATATT TTTTTCGTCA CCTCCATAGC AGCCGAAAAA GCCTTCAAGA CATCCTCCAT CTACTGCATG ACGAAATTTG CACAAAAAGG GTTGCTCGAA GCGCTCCGCC TCTACGCCAG AGAGTGCAAT GTCCGTATCA CCAACGTCAT GCCGGGAGCG GTTTATACCC CCATGTGGGG AGAAGTACCC GAAGAAATGC AGGCGATGAT GATGATGCCT GAAGACATTG CCGCCGCTGT TTCAGGAGCC TATTTTCTGC CGCAAAGAAC ATCGGTGGAG GAACTTGTCA TACGTCCGGT CGGAGGAGAT ATCAATGAAT GA
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Protein sequence | MRHIILITGA GKGIGKAIAL EFARYAERNP SFEPVLVLAS RTPGDLEATA AECRNSGAET DCITTDIADA ANALHLGETV VERYGTVDCL VNNAGVGRFK PFAELTEEDF DYTVATNLKG TFFLTQKLFP VMEKQKKGHI FFVTSIAAEK AFKTSSIYCM TKFAQKGLLE ALRLYARECN VRITNVMPGA VYTPMWGEVP EEMQAMMMMP EDIAAAVSGA YFLPQRTSVE ELVIRPVGGD INE
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