Gene Clim_1818 details

Gene Information

• Locus tag: Clim_1818
• Symbol: radC
• ID: 6355158
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 1995055
• End bp: 1995723
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 642669421
• Product: DNA repair protein RadC
• Protein accession: YP_001943836
• Protein GI: 189347307
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2003] DNA repair proteins
• TIGRFAM ID: [TIGR00608] DNA repair protein radc

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.852458
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCATTC ATGATCTCGA CCCTGAAAAC AGGCCAAGGG AACGACTGCT GCTCTATGGC 
GCCTCATCAC TCAGCCCGGC GGAACTTCTG GCAATCATCC TCCGTTCAGG TTCAAAAAAT 
CTGAACATCA TCGATACCTG TCACGAAATC ATCGCAGCTT ACGGACTTGA ACGACTCGCC 
GACCTTCAGC TTTCGGAACT GCAGAAAATC AGAGGAATAG GCCCGGCAAA AGCAATGCAG 
ATCTCTGCTA TTTTCGAACT GAACAAACGG ATTCATTTCC GAAAAAACAA TAACAGAAAA 
ATTCTGTCGG CCAGAGATGT GTCCGAATAC ATGGCGGGAC GAATACCGGA TGAAACAAAG 
GAACACCTTT TTGTTCTGCA TCTCAATACC AAAAACAGGG TGATCCGTCA CGACATCGTA 
TCGGTAGGAA CCCTGAACGC ATCACTTATC CATCCGAGAG AGGTTTTTAA ATCAGCTATC 
AGAGAGAGCG CTCACGCAAT TATTCTCGTA CACAACCACC CTTCGGGGGA TGTGGAACCG 
AGTAACGCTG ACCGGCAGGT AACTGAAATT CTCAAAAAGG CAGGAGCGAT ACTGCAGATA 
GAACTGCTCG ATCATGTAAT TGTAGGAAAA GAAAACTGGT TCAGTTTTCG TGAACACTCG 
CTTCTCTGA 

 

Protein sequence

MRIHDLDPEN RPRERLLLYG ASSLSPAELL AIILRSGSKN LNIIDTCHEI IAAYGLERLA 
DLQLSELQKI RGIGPAKAMQ ISAIFELNKR IHFRKNNNRK ILSARDVSEY MAGRIPDETK 
EHLFVLHLNT KNRVIRHDIV SVGTLNASLI HPREVFKSAI RESAHAIILV HNHPSGDVEP 
SNADRQVTEI LKKAGAILQI ELLDHVIVGK ENWFSFREHS LL