| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1816 |
|---|
| Symbol | |
|---|
| ID | 6355156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1992499 |
|---|
| End bp | 1993854 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642669419 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_001943834 |
|---|
| Protein GI | 189347305 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.677362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACACAC TCATGCTTGC GCGGCTTCAG TTCGCGCTCA CCTCCGTTTT TCACTTCTTC
TTCGTACCGC TCACGCTCGG CCTTTCCATC TTCACGGCGA TCATGGAAAC CGCCTGGGTC
AGGACGGGTG AGGAAAAGTA CCGGAAGCTG ACGAAGTTCT GGGGCAAACT GTTCCTTATC
AACTTTGCGG TCGGCGTCGT GACCGGAATC GTCATGGAGT TCCAGTTCGG CATGAACTGG
TCGGAGTACT CCCGCTTTGT GGGCGACATC TTCGGCGTTC CGCTCGCCAT TGAAGCGCTG
CTCGCCTTTT TCCTCGAATC GGTTTTTCTC GGTATATGGG TATTCGGATG GAATAAAATC
CCCAAAGCCC TCCACGCCGC ATCGATCTGG CTGGTCGCCA TCGGCTCGAA CCTTTCGGCG
CTCTGGATTC TCGTGGCAAA CTCCTTCATG CAGTCTCCTG TCGGCTACAG AATGGCTGCG
GACGGCTCCA GGGCAGAGAT GATCGACTTT TCAGCACTGC TTTTCAATCC CTACGTCTGG
AAGCAGTTCC CGCATGTTCT GGCCGGCGGG CTCGTCACCG GAGGATTTCT CGTCATAGCC
GTCAGCTCAT GGCACCTTGT CAGAAATTCG AAGGAGCGCA GCGAATTCGA GACGTCAATG
AAATTCGGCG CCATCTACGC CTTTATCGGC ACCATACTCG TCACCCTTGC CGGACACACC
CAGATGCAGG ATCTCATCGA ATCCCAGCCC ATGAAAGTCG CCGCTGCCGA AGCGCTATGG
GAAACCGAAA ATCCTGCAAG CTTCTCACTC TTCACGGTCG GAAATGAAAA AGAACTTAAA
GACGTCTTTG CCATCCGTAT ACCCGGCATG CTCTCCTTCC TGGCCTACAA CTCCTTCGAA
GGCGAAGTCA AAGGCATCAA GGATCTGCAG AAGGAGTACG AAATCAAATA CGGTCCGGGC
AACTACATTC CCTCCATCAT CACGGCCTAC TGGAGTTTCC GGTTCATGGT CGGCGCAGGA
ACGCTCATGC TTCTTGTATC GCTCATTGCA CTCTACAAGG TGATCAGGGA AAACTACACA
TTCTCCCCGT TGCTGGGAAC GCTCCTTTTC TGGTCGTTCC TGCTACCCTA CATTGCAAAT
TCTTCGGGAT GGATTCTGGC CGAAATGGGC CGCCAGCCAT GGATAGTCTT CGGCCTTCTG
AAAACCGAGG ATGCCGTTTC TCCGGCATCG GTTGTCAGCA GCACGGAACT GCTCATCTCA
CTTGTCGTCT TCGTACTCAT CTACGGGCTG CTCACGCTCG TCGATGTTTT CCTCTTGAAA
AAACACGCAG CAGCAGGCCT TGAAGCTGCC GAATAA
|
|---|
| Protein sequence | MDTLMLARLQ FALTSVFHFF FVPLTLGLSI FTAIMETAWV RTGEEKYRKL TKFWGKLFLI
NFAVGVVTGI VMEFQFGMNW SEYSRFVGDI FGVPLAIEAL LAFFLESVFL GIWVFGWNKI
PKALHAASIW LVAIGSNLSA LWILVANSFM QSPVGYRMAA DGSRAEMIDF SALLFNPYVW
KQFPHVLAGG LVTGGFLVIA VSSWHLVRNS KERSEFETSM KFGAIYAFIG TILVTLAGHT
QMQDLIESQP MKVAAAEALW ETENPASFSL FTVGNEKELK DVFAIRIPGM LSFLAYNSFE
GEVKGIKDLQ KEYEIKYGPG NYIPSIITAY WSFRFMVGAG TLMLLVSLIA LYKVIRENYT
FSPLLGTLLF WSFLLPYIAN SSGWILAEMG RQPWIVFGLL KTEDAVSPAS VVSSTELLIS
LVVFVLIYGL LTLVDVFLLK KHAAAGLEAA E
|
|---|
| |