Gene Clim_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1809 
Symbol 
ID6355149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1986572 
End bp1987033 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content55% 
IMG OID642669412 
Productcytochrome c class I 
Protein accessionYP_001943827 
Protein GI189347298 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR00782] cytochrome c oxidase, cbb3-type, subunit III 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGATA CAGGAGAACC CGGAGAGGGC CATAACAGCA TCCCGAAGGG ATGGCTGCTC 
TTCTTTTTCG GCGTCATCAT CTTTCTGGTC TGGTACATCG TTTCCTATAC GCCGGCTATT 
TCAGGCTGGT CGTTTTACAG GGGATTTGAA GAAGAGATGG CAAAAGCCGT TCCCGCGGCG 
AGCCAGAGCC CAGGGACTCC CGACAAGTAC AGCGGCCAGC CGGCAGCCAT TGCAGAAGGC 
AAGGCAATAT ATGCCGAAAG CTGCGCAGCA TGCCACAATG CCGACGCAAC GGGCGGTATC 
GGCCCGAACC TCACGGTAAC ACTGAAATAC GGCTCGACCG CTCAGGATAT CTATGAATCG 
GTGGCCAACG GAAGACCGAA CGGCATGCCT CCATTCATGC AGCAGCTTGG AAAAGAGCGG 
ATCTATAAGC TTGCAGCCTT TCTGGAAAGT GTGAAGAAAT AG
 
Protein sequence
MHDTGEPGEG HNSIPKGWLL FFFGVIIFLV WYIVSYTPAI SGWSFYRGFE EEMAKAVPAA 
SQSPGTPDKY SGQPAAIAEG KAIYAESCAA CHNADATGGI GPNLTVTLKY GSTAQDIYES 
VANGRPNGMP PFMQQLGKER IYKLAAFLES VKK