Gene Clim_1795 details

Gene Information

• Locus tag: Clim_1795
• Symbol: uvrC
• ID: 6354624
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 1973165
• End bp: 1975024
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642669398
• Product: excinuclease ABC subunit C
• Protein accession: YP_001943813
• Protein GI: 189347284
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.625929
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCAGAGA GAGAAAACAG CTCCATCCCT GAAAAAATCG CAACCCTGCC GACCTCCCCC 
GGGGTCTATC AGTTCCGGAA CGCTTCCGGA AAAGTGATCT ATGTAGGCAA GGCAAAAAAT 
CTCAGAAACA GGGTGCGCTC CTATTTCAGG GATTCCCGTC AGCTCTACGG TAAAACGCTG 
GTGATGGTCG GCCACATCGC CGATCTGGAG GTCATTATCA CCTCTTCGGA AGTCGAAGCG 
CTCATCCTTG AAAACAATCT CATCAAGGAG CTTAAACCCC GTTACAACGT CAACCTCAAG 
GACGACAAAA CCTATCCCTA TCTGGTTATA ACCAATGAGC CGTTCCCCCG GATTTTTCTC 
ACCCGGTACA TAAAACGGGA CGGATCGATC TGGTTCGGTC CTTACACCGA AGCACGTCAG 
CTTCGCCTCA TTCTCGATCT CATCGGCTCC ATTTTTCCCC TCAGAAGCTG CAAACACCGG 
TTCACTGCAG AGAGCATCGC ATCAGGTAAA TTCAGGGTCT GCCTCGACTA TCACATTCAT 
AAATGCAAGG GCCCCTGCGA AGGGTTTCAG AGCGAAGCTG ACTATCGGCA GATGATCGAA 
GAGGTCGTCA GGCTTCTGAA AGGCAGAACG TCCGGCCTCA TCCGATCCCT CACGGAAAAA 
ATGCACGAAC ATGCCGCCGA GCTGAAATTC GAAGCCGCAG CAGAAATCCG ATCTCAGCTT 
GACAGCCTGA AACGCTACGC CGAACGGCAG AAGGTCGTCA GCCCCGATGG TGCGGATCGC 
GACGTTATTG CCCTTGCTGC CGGAGAAGAC GACGCCTGTG CCGTGATCTT CAAAATCCGC 
GAAGGCAAGC TGCTCGGATC GCAGCGCATA TACATGAACA ATACCGGAGG CGAAACCGAA 
ACCGTGCTGC TGGCCAAAGC TGCGGAAAAT TACTATCTCG AAACGATTGA CACCATTCCC 
GACGAAATAC TTCTGCAGCA TACGCTTGTG GCCGAAAACG AGGAAACGCT GAAAAGCTTT 
GTCGCCGCAA AAAAACTGGC GGAACCGGGA CGCAAAACCG CAATACGGAT CGTCGTGCCG 
CAAATCGGCG AAAAAGCCCA TCTGCTCGAC ATGTGCCACC GGAACGCACG CCACCATCTC 
GAAGAGTATC TGATCCAGAA ACAGAAACGG GGAGAAGCGG CAAGAGAGCA TGCCGGACTG 
AACGATCTCC AGGAGCTGCT CCACCTGGAA AAGCCGCCGG AACGAATCGA ATGCTTCGAT 
AACTCCCATT TTCAGGGTAC GGACTATGTC AGCTCCATGG TCTGTTTTGT ACACGGCAAA 
CCGAAAAAAT CCGAATATCG CAAATTCAGG CTCAGAACCA TTGAGGGGTC GGACGACTAT 
GCCGCAATGG AAGAGGTGCT GAACCGACGC TACACCGGGT CCCTTGCCGA AGAACTCCCG 
TTTCCGGACC TCATTGTGGT CGACGGAGGA AAGGGGCAAG TCAATATCGC TCACCGCATA 
CTTGCCGAAT CAGGTCTGAA CATACCGGTC ATCGGACTGG CAAAACGTCT TGAAGAGATA 
TTTCTCCCCC ATGTCAGCGA TCCGTTCAAT CTTCCCAAAA CCTCTCCGGC GCTCAGGATG 
CTGCAGCAGC TGCGCGACGA AGCCCATCGA TTTGCAGTTA CCTATCACCG AAAACTTCGT 
TCAGAGCGAA CCCTGCAGAC CGAACTTACC GCAATCGCCG GAATAGGTGA AAAAACAGCT 
CACAAACTGC TGCAGCACTT CGGTTCCGTG AAACGCATCT CCGAAGCCTC ACTGGAGGAT 
CTCGTTTCGG CTGCAGGCAG AAATACAGCC GAAAAAATCC ACCGCGTTTA TCACCCCTGA 

 

Protein sequence

MPERENSSIP EKIATLPTSP GVYQFRNASG KVIYVGKAKN LRNRVRSYFR DSRQLYGKTL 
VMVGHIADLE VIITSSEVEA LILENNLIKE LKPRYNVNLK DDKTYPYLVI TNEPFPRIFL 
TRYIKRDGSI WFGPYTEARQ LRLILDLIGS IFPLRSCKHR FTAESIASGK FRVCLDYHIH 
KCKGPCEGFQ SEADYRQMIE EVVRLLKGRT SGLIRSLTEK MHEHAAELKF EAAAEIRSQL 
DSLKRYAERQ KVVSPDGADR DVIALAAGED DACAVIFKIR EGKLLGSQRI YMNNTGGETE 
TVLLAKAAEN YYLETIDTIP DEILLQHTLV AENEETLKSF VAAKKLAEPG RKTAIRIVVP 
QIGEKAHLLD MCHRNARHHL EEYLIQKQKR GEAAREHAGL NDLQELLHLE KPPERIECFD 
NSHFQGTDYV SSMVCFVHGK PKKSEYRKFR LRTIEGSDDY AAMEEVLNRR YTGSLAEELP 
FPDLIVVDGG KGQVNIAHRI LAESGLNIPV IGLAKRLEEI FLPHVSDPFN LPKTSPALRM 
LQQLRDEAHR FAVTYHRKLR SERTLQTELT AIAGIGEKTA HKLLQHFGSV KRISEASLED 
LVSAAGRNTA EKIHRVYHP