| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1794 |
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| Symbol | |
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| ID | 6354623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 1971254 |
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| End bp | 1973038 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642669397 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_001943812 |
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| Protein GI | 189347283 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0136163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTAC AAACGTGGAC GTATATCATC GTAGGCGCTA CGTTTCTGAT CTATATCGCA
ATCGCGATAT GGGCAAAAGC TGGCTCTACA AAGGAATTCT ACGTTGCCGG TGCAGGCGTT
CCGCCTATCA TCAACGGCAT GGCAACCGCT GCGGACTGGA TGTCGGCGGC ATCATTCATC
TCGATGGCCG GTCTTATCTC CTTTATGGGT TACGACGGCT CGGTTTACCT GATGGGCTGG
ACGGGCGGTT ACGTGCTGCT CGCGCTTCTG CTCGCTCCTT ACCTGAGAAA GTTCGGCAAG
TTCACCGTTC CCGACTTCGT CGGCGACCGA TACTACTCCA ACGTAGCGCG TACGGTAGCC
GTTATCTGCG CAATCTTCGT CTCCTTCACC TATGTCGCAG GCCAGATGCG CGGCGTCGGC
GTGGTGTTCT CCCGCTTCCT CGAAGTCGAT ATCAACACCG GCATCCTGCT CGGCATGGGC
ATCGTCTTCT TCTATGCGGT GCTCGGAGGC ATGAAAGGCA TCACCTACAC CCAGGTTGCC
CAGTACTGGG TACTGATTTT CGCGTACATG GTTCCCGCCA TCTTCCTCTC AATCATGATC
GCCGGCAATC CCATCCCGCA GTTCGGCATG GGCGGCGCAG GCTCTGACGG TGTTTACCTG
CTCGACAAGC TCGACGGCCT GCATCAACAA CTCGGGTTTG CGGCCTACAC AACCGGCTCG
AAACCCATGA TCGACGTATT TGCCATTACC GTTGCCCTTA TGGTCGGCAC CGCCGGTCTG
CCGCACGTTA TTGTCCGTTT CTTCACCGTG CCGAGAGTCC GTGACGCTCG CATCTCTGCC
GGATGGGCGC TTATCTTCAT CGCCCTGCTC TACACCACGG CGCCGGCAAT CGCCACCTTC
GCCCGCCTCA ACCTGATCCA GACCGTCAGC AACAACAGCT ACACCGACAT GCCCGGCTGG
TTCAAAAAGT GGGAAAAAAC CGGTCTGCTT GCATGGATGG ACAAGAACAA CGACGGCAAA
ATTCAGTACA CCGGCAAGAA CGCCGGCGGC GGAGATCCGT TTGAAGGCAA GAAACCGGAA
TTCACCAAGG AAAAAGGGCA GCACGGAGAG CTTCTCATGT CGAACAAGCC CACGGACAAC
TCCAATGAGC TCTTCATCGA CAAGGACATC ATGGTGCTCG CCAACCCGGA AATCGGCAAC
CTGCCGAATT GGGTAATCGC ACTGGTAGCC GCCGGCGGTC TTGCTGCAGC TCTATCGACG
GCAGCGGGTC TCCTGCTGGT CATCTCGACC TCTATTTCGC ACGATCTCAT CAAAAAGCAG
ATCAATCCGA ACATCAGCGA AAAAGGCGAA CTGATGTACG CCCGTATCGC GGTCGGCGTA
GCCATCGTGG TTGCCGGATA CTTCGGCATC AACCCTCCCG GATTCGTGGC CGAAGTGGTG
GCCTTCGCCT TCGGTCTTGC TGCGGCCTCT TTCTTCCCGG TCATCATTCT CGGCATCTTC
TCCAAGAGAA TGAACAAGGA GGGAGCCATC TCGGGCATGA TCACCGGACT GCTCTTCACT
GCGGCCTACA TCGTCTATTT CAAATTCATC AGTCCGGATA TGAACAAGCC GGAATTCTGG
TGGTTCGGCA TATCACCGGA AGGCATCGGA ACTCTCGGCA TGCTGATCAA CGTTGCCGTG
AGCTTTGTCG TTTCGCGCAT CACCCCTGCA CCTCCCCAGG AAATCCAGGA GCTGGTCGAC
AGCCTGAGAT ACCCGAAAGG AGCCGGAGAG GCTTCTGCAC ACTGA
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| Protein sequence | MDVQTWTYII VGATFLIYIA IAIWAKAGST KEFYVAGAGV PPIINGMATA ADWMSAASFI
SMAGLISFMG YDGSVYLMGW TGGYVLLALL LAPYLRKFGK FTVPDFVGDR YYSNVARTVA
VICAIFVSFT YVAGQMRGVG VVFSRFLEVD INTGILLGMG IVFFYAVLGG MKGITYTQVA
QYWVLIFAYM VPAIFLSIMI AGNPIPQFGM GGAGSDGVYL LDKLDGLHQQ LGFAAYTTGS
KPMIDVFAIT VALMVGTAGL PHVIVRFFTV PRVRDARISA GWALIFIALL YTTAPAIATF
ARLNLIQTVS NNSYTDMPGW FKKWEKTGLL AWMDKNNDGK IQYTGKNAGG GDPFEGKKPE
FTKEKGQHGE LLMSNKPTDN SNELFIDKDI MVLANPEIGN LPNWVIALVA AGGLAAALST
AAGLLLVIST SISHDLIKKQ INPNISEKGE LMYARIAVGV AIVVAGYFGI NPPGFVAEVV
AFAFGLAAAS FFPVIILGIF SKRMNKEGAI SGMITGLLFT AAYIVYFKFI SPDMNKPEFW
WFGISPEGIG TLGMLINVAV SFVVSRITPA PPQEIQELVD SLRYPKGAGE ASAH
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