| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1788 |
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| Symbol | pyrB |
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| ID | 6354617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 1965516 |
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| End bp | 1966442 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642669391 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_001943806 |
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| Protein GI | 189347277 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000240723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAACC TTACCGGATT ATGCAACCTT CCGGCCGGTG ACATCCATAC GCTGCTCGAC
CTGGCAGCTG TATTCAAAAA GAGACTGGTT ACCCCCGATC CATCATTTTC CGTCACGCTG
CAAAACAAAC GCATCGCACT GGTTTTTTTC GAGAACTCCA CTCGTACCCG TTTCTCTTTT
GATATAGCCG CCCGCCATCT CGGCGGAAGC ACCCTGAGCT TCAGTGCATC CGGAAGCAGT
GTCAGCAAAG GAGAATCTCT CGGCGACACC ATCAGAAACC TTGAAGCCAT GCAGGTTGAC
GCCTTCGTAC TGAGGCATGC ATCGTCAGGA GCCGCAGATT TCATCGCCGG CATTACCGCA
AAAACCGTCA TCAACGCAGG CGACGGCTCT CACGAACACC CGACGCAGGC ACTGCTCGAC
ATTTTCACGC TTCGCGAACA CTTCGGTGCG GTAAAGGGGC TCAACATCGT CATTCTCGGC
GATGTACTGC ACAGCCGGGT AGCCCGCTCA AATATTTTCG GTCTGAAAAC TCTTGGCGCC
AATGTCGCTG TCTGCGGACC GGCCACCCTG CTTTTTTCCG ATACCTCGCA CCTCGGAGTC
AGCATATTCA CCGATCTCGA CAAGGCCATC GAATGGGCGG ATGCCGCTCT TGTACTCCGG
CTGCAGCTTG AACGGGCAAC CGGAGGGTAC CTCCCATCGC TTGAAGAGTA CTCCACGCAC
TTCGGGCTCA ACGACGAACG CCTCGAAAGA GTACGCAAAC ATCTTCTGGT TCTCCATCCG
GGTCCCATCA ACAGGGAGAT CGAAATATCC AACAACGTAG CCGACCGGAT ACAACCTCCC
GGGTACTCGA AAAGCATGCT GCTTGAACAG GTCTCGAACG GTGTCGCCGT TCGCATGGCT
GTCCTGCAGA CGCTGCTTGC CGGATAA
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| Protein sequence | MKNLTGLCNL PAGDIHTLLD LAAVFKKRLV TPDPSFSVTL QNKRIALVFF ENSTRTRFSF
DIAARHLGGS TLSFSASGSS VSKGESLGDT IRNLEAMQVD AFVLRHASSG AADFIAGITA
KTVINAGDGS HEHPTQALLD IFTLREHFGA VKGLNIVILG DVLHSRVARS NIFGLKTLGA
NVAVCGPATL LFSDTSHLGV SIFTDLDKAI EWADAALVLR LQLERATGGY LPSLEEYSTH
FGLNDERLER VRKHLLVLHP GPINREIEIS NNVADRIQPP GYSKSMLLEQ VSNGVAVRMA
VLQTLLAG
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