| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1783 |
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| Symbol | |
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| ID | 6354612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1960251 |
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| End bp | 1961348 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642669386 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_001943801 |
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| Protein GI | 189347272 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.146448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTCA TCGATGAATA CCGGGATCCG CTGATCGCGC TTCGTCTTGC GGACGAGATA
AAGCGCAGGG CGACGAGGCG ATGGACCATC ATGGAGATCT GCGGAGGGCA GACCCATTCG
ATCATGCGAA ACGGGATCGA TCAACTGCTT GGCGATACCA TCGAGCTGGT TCACGGTCCA
GGATGCCCGG TTTGCGTCAC GCCGCTTGAA GTTATCGATC AGGCGCATTC GATTGCATCG
ATGCCGGGGG TGATTTTCGC TTCTTTCGGG GATATGCTGA GGGTTCCGGG CAGTGTCAGC
GATCTTTTCA CGGTTCGCAG CAGGGGCGGG GATGTAAGAA TCGTCTATTC TCCGCTCGAA
GCTCTGCAGT TCGCGCGCGA TAATCCGCAG AAGGAGGTTG TATTTCTTGC CGTGGGCTTC
GAGACTACTG CACCGGCCAA TGCCATGGCC GTTCATCAGG CGGCCCGCGA AGGGATCGAC
AATTTTTTCG TGCTTTGCAG TCAGGCGCTG GTTCCTCCGG CAATGCGCGC GATTCTCTCG
TCACCGGAGA ATCGTGTGGA GGGTTTCCTT GCCGCCGGTC ACGTCTGTGC AGTGACCGGT
TATGAAGAGT ACCGGCAGAT AGCCCGGGAT TTTCATGTGC CGATCGTTCC TACCGGTTTT
GAGCCGGTGG ATCTGCTGGC CGGAATTCTT GAAACGGTCG GATTGCTCGA AGATGGGCGG
GCCGAGGTCG TCAACCGCTA TGGCAGGGTG GTCTCTTCTG ACGGCAATAT CCATGCAAGA
GAGCTTGTCT CGACCGTTTT CGAGGTTGCC GACCGTCAGT GGCGGGGTAT CGGACTTATT
CCGGGGAGCG GCCTCTCTCT GCGCCGGGAG TTTTTACGCT TCGATGCGGC CCGGAAGTTC
GCCGTGGCTC ATATCTGCAC GGCAGAGTCC CCTCTGTGCA GAAGCGGTCA GGTTTTGCAG
GGGAATCTTA AACCCGATGC CTGCGAGGCG TTCGGCAGGG AGTGCACCCC TTTACATCCG
CTTGGCGCGA CGATGGTTTC TTCCGAAGGC GCCTGTGCGG CATATTACCG GTATCATCGA
AATTCCGAAC TCTTATGA
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| Protein sequence | MKFIDEYRDP LIALRLADEI KRRATRRWTI MEICGGQTHS IMRNGIDQLL GDTIELVHGP
GCPVCVTPLE VIDQAHSIAS MPGVIFASFG DMLRVPGSVS DLFTVRSRGG DVRIVYSPLE
ALQFARDNPQ KEVVFLAVGF ETTAPANAMA VHQAAREGID NFFVLCSQAL VPPAMRAILS
SPENRVEGFL AAGHVCAVTG YEEYRQIARD FHVPIVPTGF EPVDLLAGIL ETVGLLEDGR
AEVVNRYGRV VSSDGNIHAR ELVSTVFEVA DRQWRGIGLI PGSGLSLRRE FLRFDAARKF
AVAHICTAES PLCRSGQVLQ GNLKPDACEA FGRECTPLHP LGATMVSSEG ACAAYYRYHR
NSELL
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