Gene Clim_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1740 
Symbol 
ID6354568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1911288 
End bp1912427 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content58% 
IMG OID642669344 
Productbeta-lactamase 
Protein accessionYP_001943760 
Protein GI189347231 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATCT GCCGGTCACT CTTTATCGCG CTGCTGACCG TTGCCGCCGC GATCTCCATA 
CCCCGGCCCG CAACAGCCGG GGACTTCGGA CCCCTTGAAA CAATTGCTGA AGCAGCTGTA
AGGGATGGCG TGTTTCCCGG AACGAGTATA GCCGTGATTC ACCATGGAAA AACCGTTTTT
CACCGGGCTT TCGGGCGGCA ATCCTTTTCA GCCGACTCGC CCGCAGCCGA CACCACTACC
ATCTACGACC TCGCATCGCT CACCAAAGCC GTCGTCACCA CCGGCATCGT CATGCAACTC
GTCGAAAGGG ATTCGCTCAA TCTCGACGCC CCGGTCTCAC GATACATGCC GGCATTCGCC
TCCCGCGGAA AACAGCAGGT CACGATACGC AACCTCATGC TGCACAATTC GGGATTACGT
GCACATACGC TGTTTCATAA AACCTGCCGG ACGCCCGAAG AGGTTTTCCG GGCCATAGCT
GCCGACACCC TGCTCTCCCC GCCCGGTATC AAAACCCTGT ACAGCGATCT CGGCTTCATC
ACGCTCGGAC GTATCGTCGA AACCGTAACC GGACGGACTC TCGAAGCCAA CTTCCGGCAG
CGTTTCGCCC TGCCGCTCGG CATGCGGCGG ACCATGTTCA ATCCTCCGGC TTCACTCTTC
AGCTCCATCG CGCCAACGGA ACAGGACACC TCATGGCATT CAAGCCTCCG GCGCCCGCTC
GTCCACGACC AGAACGCCGC GCTGCTCGGC GGCGTGGCCG GCCATGCAGG ACTCTTCTCC
ACAACCGGCG ATCTCATACC CTATGTCCGT ATGCTGATGC AGAAAGGATT GTACGAAGGG
AAACCGTACG CCAGACCTGA AACCGTGCGC ATGTTCACAT CGAGGAACGG AAAAGACTCG
AGGACCCTCG GATGGGATCT GCGTTCTCTT GAAGGAGCAT CTTCAGCCGG ATCGGCTTTT
TCAACGTCAT CATGGGGACA TCTCGGTTTC ACCGGCACCA GCATCTGGGT CGATCCGGAA
AAGGACCTTG CAGTCATCAT GCTCAGCAAC CGCGTCCACC CGACATCGGA AAACATCAAA
ATCCGTAAGT TCCGTCCCCT CCTGCACGAC ACCGTGGTAC GATGCCTGGA ACTGAAGTAA
 
Protein sequence
MGICRSLFIA LLTVAAAISI PRPATAGDFG PLETIAEAAV RDGVFPGTSI AVIHHGKTVF 
HRAFGRQSFS ADSPAADTTT IYDLASLTKA VVTTGIVMQL VERDSLNLDA PVSRYMPAFA
SRGKQQVTIR NLMLHNSGLR AHTLFHKTCR TPEEVFRAIA ADTLLSPPGI KTLYSDLGFI
TLGRIVETVT GRTLEANFRQ RFALPLGMRR TMFNPPASLF SSIAPTEQDT SWHSSLRRPL
VHDQNAALLG GVAGHAGLFS TTGDLIPYVR MLMQKGLYEG KPYARPETVR MFTSRNGKDS
RTLGWDLRSL EGASSAGSAF STSSWGHLGF TGTSIWVDPE KDLAVIMLSN RVHPTSENIK
IRKFRPLLHD TVVRCLELK