Gene Clim_1734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1734 
Symbol 
ID6354562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1905885 
End bp1906577 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content51% 
IMG OID642669338 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_001943754 
Protein GI189347225 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGGA ACAGCATCTG TACGGAAAAA ACAATACCGG TCATTCTTGC AACCGGCAAC 
CCCGACAAGG TGAAAGAACT CCGTCCGATG CTGGAGCACA TTTCGCCACT GTTTTCCGTT
TTTTCACTCT CCGATCTCGA CATTGCAGCC GACATCGAAG AAACGGAACA AACGCTTTCG
GGAAACGCGC TGCTCAAAGC CGACGGGATC TTTGCCATCC TTGAGCAGCG CTTCCCCTTT
CTGGTAACGA TAGCTGACGA TACAGGCCTG GAAGTACTCT CCCTCGGTGG CGAACCCGGA
GTGCTGTCGG CAAGGTTTGC GCCGGTTAAG ACAGGCATGA AGCCAACCTA TGAAGACAAT
ATCGATCACC TGCTTCTTCG CATGAACGGT ATAAAGGAAA GAAATGCCCG TTTCCGCACC
GTTATCGCGC TGAAAGGGCG CATTCCTTCG GGAGAAACAG CGTATGCGTT CCGACTCACC
GCTGAAGGCG TGGTTGAAGG CTCCATCGTC GAAGAGAGAA AAGGGATTAT GGGGTTTGGC
TATGATCCGG TATTTCATGT AACTTCAGCG GGAAAGACCT ATGCCGAAAT GGCTGCTGAA
GAAAAAAACA CAATCAGTCA CCGGGCAATT GCCCTGCAGA AAGCATCGAA TGCTCTTTCC
GACATCATGA AAAAGCACTA TACCCCTCAA TAA
 
Protein sequence
MNGNSICTEK TIPVILATGN PDKVKELRPM LEHISPLFSV FSLSDLDIAA DIEETEQTLS 
GNALLKADGI FAILEQRFPF LVTIADDTGL EVLSLGGEPG VLSARFAPVK TGMKPTYEDN
IDHLLLRMNG IKERNARFRT VIALKGRIPS GETAYAFRLT AEGVVEGSIV EERKGIMGFG
YDPVFHVTSA GKTYAEMAAE EKNTISHRAI ALQKASNALS DIMKKHYTPQ