Gene Clim_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1716 
Symbol 
ID6355794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1887593 
End bp1888879 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content47% 
IMG OID642669320 
ProductSte24 endopeptidase 
Protein accessionYP_001943736 
Protein GI189347207 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAGA TTTTTGAAAG TGTTGCTATG AATGTTTTCG GTGTCGTTAT TCTGTTGACG 
CTTTTTGTGA CATTTTTCAT GAAAGTTGCC GCAGATATTC TCAATCTCAG GGCGTCGACG
GGGGATCTTC CCATAGAGTT TCAAGGCGTC TATGAACCGG GGGCCTATCG TAAATCTCAG
GAGTACCTGA AAACAACCAC ATGGTTTTCG CTTGTCACCT CTCTTTTTGA TCTTCTGCTG
CTTCTTGTTT TCTGGTTTTC CGGCTCGTTT GATCTGCTTG ACCGGTTTTT CAGGGGGTTC
GGGTTAGGTG AGGTGCCGAC CGGGCTGCTT TATATAGGTT CGCTTCTTTT CCTGCAGGTT
ATTGCAGGGC TCCCATTCAC GCTTTATCGT ACCTTTGTCA TCGAAGAGCG ATTCGGGTTC
AATAAGATGT CTCCGGTGGT GTTTGTCGGC GATATGCTCA AATCATTTCT GCTTGCCGTG
CTACTCGGAG CCCCCGCACT TGCGCTTCTT CTCTGGTTTT TCGGGTATGC CGAAACGTCT
GCATGGCTGT GGGCATGGGG CGCTTTTATG CTTATCAGTC TCGTGCTGCA GTATGTTGCG
CCAACCTGGA TTATGCCGCT TTTCAACCGC TTCGAGCCCC TCGGGGAGGG TGAACTGAAA
ACTGCTATTC TGCAGTATGC CAAAACCACA GGGTTCCCTC TCGCTGGAAT TTTTGTCATC
GATGGTTCGA AGCGCTCTTC AAAAGCCAAC GCTTTCTTTA CCGGGTTCGG ACACCGCAAG
AGAATAGCCC TTTTCGATAC CCTGATAGCC AATCATACTG TTGATGAACT GGTTGCCGTC
CTTGCTCACG AAACAGGGCA TTTCAAGAAA AGGCACGTGT TGATCAATAT GATGCTCAGC
ATGATCAATC TCGGTATTAT TTTTTTTCTG CTTTCGATGT TAATGCAAAA CCGCATGCTT
TTCGATGTGT TTTTCATGAC CGATGTGTCA GTGTATGGCA GTATGGTATT TTTTATGCTG
CTCTATTCTC CCGCTGAATT TCTGCTTTCG ATTTTTCTTC AAATGCTCTC GCGCAAGCAT
GAGTACGAAG CTGATGCCTA TGCAGTTTCA ACATATTCAA ACGGGGTGGC GCTTGCCGAT
GCATTGAAAA AACTTTCGTG CAGTAATCTT TCGAATCTTA CTCCCCATCC GTTTTACGTT
TTTCTCAATT ATTCCCATCC GCCGGTATGT GACCGTATTC GAAGAATACG ACAGTTGTCG
GGAAACGGGA TATCATCACC GAACTGA
 
Protein sequence
MNEIFESVAM NVFGVVILLT LFVTFFMKVA ADILNLRAST GDLPIEFQGV YEPGAYRKSQ 
EYLKTTTWFS LVTSLFDLLL LLVFWFSGSF DLLDRFFRGF GLGEVPTGLL YIGSLLFLQV
IAGLPFTLYR TFVIEERFGF NKMSPVVFVG DMLKSFLLAV LLGAPALALL LWFFGYAETS
AWLWAWGAFM LISLVLQYVA PTWIMPLFNR FEPLGEGELK TAILQYAKTT GFPLAGIFVI
DGSKRSSKAN AFFTGFGHRK RIALFDTLIA NHTVDELVAV LAHETGHFKK RHVLINMMLS
MINLGIIFFL LSMLMQNRML FDVFFMTDVS VYGSMVFFML LYSPAEFLLS IFLQMLSRKH
EYEADAYAVS TYSNGVALAD ALKKLSCSNL SNLTPHPFYV FLNYSHPPVC DRIRRIRQLS
GNGISSPN