Gene Clim_1715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1715 
Symbol 
ID6355793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1886532 
End bp1887581 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content50% 
IMG OID642669319 
ProductAgmatine deiminase 
Protein accessionYP_001943735 
Protein GI189347206 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2957] Peptidylarginine deiminase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.712045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAACAA ACCGATACAC CATGCCTCCC GAATGGGCCC CCCATAAGGC AACCTGGCTT 
TCATGGCCGC ACAAGCTCGA GTCCTGGCCT GGAAAATTCG AACCTGTTCC TTTTGTCTTT
GCGGAAATTG CCGCATGGCT GAGCACCTCG GAGGAGGTAC ACATCAATGT GCTTGACGAC
GACATGGCCG GCAATGCGCG TGAGCTTATC GGCGCCGATC CGCACGCAGA GGCTGTGATG
GATCGGATAT TTTTTCATTG TATTCCCACC AATGACGCAT GGTGTCGGGA TCATGGGCCG
AACTACGTTT TTCTGCATGA AGACGAGCGC ATGGAGAAGG TTATCGTAAA CTGGGAGTAT
AATGCCTGGG GAGGCAAGTA TGAGCCTTAT GACGACGATA ATGCTGTGCC TGAAAGAGTT
GGAACCCTTC AGCGTCTTCG GGTTGTCTCA ACCGGAATGG TGCTTGAAGG CGGGGCCATC
GACGTTAACG GGAAAGGGCT TCTCCTGACA ACGGAGGCAT GTCTGCTCAA TCCTAACCGC
AACCCTGAAA TGAGCCGTCC TGAGATTGAA GGCGAGCTTC TGAAATATCT TGGAGCCAGG
AAGGTTATCT GGCTTGGAGA GGGAATCGCC GGTGACGATA CCGATGGTCA TGTTGACGAC
ATGTCGCGTT TCGTCAATGA AAGAACGGTA GTAACCGCGG TAGAGGATGA TCCTGAGGAT
GAGAATTATT TTCCTCTGAA GGAGAATTAT GAGCGATTGA AGAAGTGCAC TGATCTTGAA
GGTCGTCCGT TGCAGATAAT CAGACTTCCT ATGCCCGAAC CGGTTTATTT TGAAGGTGAA
CGGCTGCCGG CAAGTTACGC TAATTTCTAT ATAGCCAATT CAGTTGTGCT GGTGCCCATC
TACCGTTCTT CGAGAGATCG CATTGCTCTC GATCTGCTTC AGGAGTGTTT TCCCGACAGG
AAGGTTGTTG GTATTGACTG TTCCGATCTG ATCTGGGGTC TTGGAGCTAT TCACTGTATT
ACACACGAAG AGCCGTTGAG GAGTTATTGA
 
Protein sequence
MLTNRYTMPP EWAPHKATWL SWPHKLESWP GKFEPVPFVF AEIAAWLSTS EEVHINVLDD 
DMAGNARELI GADPHAEAVM DRIFFHCIPT NDAWCRDHGP NYVFLHEDER MEKVIVNWEY
NAWGGKYEPY DDDNAVPERV GTLQRLRVVS TGMVLEGGAI DVNGKGLLLT TEACLLNPNR
NPEMSRPEIE GELLKYLGAR KVIWLGEGIA GDDTDGHVDD MSRFVNERTV VTAVEDDPED
ENYFPLKENY ERLKKCTDLE GRPLQIIRLP MPEPVYFEGE RLPASYANFY IANSVVLVPI
YRSSRDRIAL DLLQECFPDR KVVGIDCSDL IWGLGAIHCI THEEPLRSY