Gene Clim_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1708 
Symbol 
ID6355786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1879231 
End bp1880652 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content56% 
IMG OID642669313 
ProductRadical SAM domain protein 
Protein accessionYP_001943729 
Protein GI189347200 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.995289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGTA GTGAAAAGAG TGTTTTACTT ATTTTTATCC AGGCGGATAG CGGCGTTGAC 
GGCACATCGA GGCTTGACGG CGGTTCGGCA ACGCGAGGGG TGCTGGGCTC GCTGAAGGAC
AGTGTCCTGA GCAACGTCAT TCGTCGCGCA CAGTTTGCCA TACCGCCACT CTCCCTTATG
ATTCTGAGTT CGGTTCAGGT TGAAGGGGTG CGGCAGGAGA TATGCGATCT GCGTTTCGAG
CGACTTCCTC TCGAACGGCA CTGGGACATG GCGGGGATCA GCGTCCAGAC GGGAGCGGTG
AAACCTGCTT TCGATCTTGC TCGGGTGCTT CGCTCGAAAG GCATAAAGGT GGTGCTTGGT
GGTCCGTACG TGACCATTTT TCCCGACCGG TGCCGCGAAC ACGGCGATGT GCTGGTGATC
GGAGAGGCCG ACGATATATG GCGCGAGGTA CAGGAAGATC TTCGACTCGG GGCTCTCAAG
GCGGAGTACA GAGTGGCATC GTTTCCCGAT CTCTCGCTTG ACCGGGTTGT AGGCAAGAGC
GCGCTCGATA TAGGCAGCTA TTTCACCACC AACGTGGTGC AGACCACCAG AGGATGTCCC
TACAGTTGCG ACTTCTGCAA TGTGCATGTC ATGAACGGCC ACCGGCTGCG TCACCGCACC
ATTCCTTCCG TGCTTCGGGA GGTCGAAACC TTTCTCAGGG AGGATAAAAG GATTTTTTTC
TTTCTGGACG ACACCATCAA TGCCGATGAA ATCTATGCCG AAAAACTGTT TCGGGAACTC
ATTCCGTTCG GCATAAGCTG GGTCGGTCAG GCGACTACAG CTCTTGGCGA AAAGCCTCGT
CTGCTCGATG CATTTGCCCG TTCGGGCTGC GGTGCTCTGC TTGTTGGTAT TGAAAGCCTC
GCCGACGGCA GCAACCACGC CCATCAGAAG TTTCATAATC CGGCGGTTCG CCAGGCCGCG
TGCATCAGAA ACATTCGTCA GGCTGGCATC TGCGTTTATG GCAGTTTCAT CTACGGCCTT
GACGAGGACA CGCTCGATAT GCCGCAGATG CTCGAAGAGT TTATCGAGGA GACCGGCATC
GATGTGCCCG GCATCAACCT TTTGCGCCCT ATACCCGGAA CCGGAGTTTT TGACCGGCTC
GCGCTGGAAG GCCGCCTGCT CCATTCGTCG GACGACCACG ACGCTTTCCG GTTTTCATGG
GGTCAGGAGA TGCTTTACCG GCCGCAGCGG ATAGCTCTCA AGGAGTTCAT CCCGAGCTAC
ACAGGGCTGA CTGGACGTAT CTTTACAGTT CGGAAGGCCC TGAAGCGTGC AATGAGCGCA
CCAGGGCTCC GAAGCGCCGT TTTCATGTTT AACCTGCTGT ATGTGCACAT GTACGGAACG
GCCCGTAAGG ATCTTCTTCG CCAGCTTGGT GAGCTTGGGT AA
 
Protein sequence
MSGSEKSVLL IFIQADSGVD GTSRLDGGSA TRGVLGSLKD SVLSNVIRRA QFAIPPLSLM 
ILSSVQVEGV RQEICDLRFE RLPLERHWDM AGISVQTGAV KPAFDLARVL RSKGIKVVLG
GPYVTIFPDR CREHGDVLVI GEADDIWREV QEDLRLGALK AEYRVASFPD LSLDRVVGKS
ALDIGSYFTT NVVQTTRGCP YSCDFCNVHV MNGHRLRHRT IPSVLREVET FLREDKRIFF
FLDDTINADE IYAEKLFREL IPFGISWVGQ ATTALGEKPR LLDAFARSGC GALLVGIESL
ADGSNHAHQK FHNPAVRQAA CIRNIRQAGI CVYGSFIYGL DEDTLDMPQM LEEFIEETGI
DVPGINLLRP IPGTGVFDRL ALEGRLLHSS DDHDAFRFSW GQEMLYRPQR IALKEFIPSY
TGLTGRIFTV RKALKRAMSA PGLRSAVFMF NLLYVHMYGT ARKDLLRQLG ELG