Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1707 |
Symbol | purT |
ID | 6353769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1877842 |
End bp | 1879041 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642669312 |
Product | phosphoribosylglycinamide formyltransferase 2 |
Protein accession | YP_001943728 |
Protein GI | 189347199 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) |
TIGRFAM ID | [TIGR01142] phosphoribosylglycinamide formyltransferase 2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0749454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGAAAA CAATCATGCT GCTCGGCAGC GGAGAACTGG GCAGGGAGTT CGTTATTGCG GCAAAACGTC TTGGGCAATA CGTGATTGCT GTCGACAGCT ATAACAATGC GCCGGCGCAG CAGGTTGCCG ACGAGCGCGA AGTGATCGAC ATGCTGGACG GCAATGCTCT CGATGCTTTG GTGGCCAGGC ACCGACCCGA TATGATCGTG CCTGAAATCG AGGCCATCCG CACCGAACGA TTCTACGACT ATGAGGAGCA GGGAATACAG GTGGTGCCTT CGGCACGTGC CGCGAATTTT ACGATGAATC GGAAGGCCAT TCGTGATCTC GCTTCAAAGG AGCTTGGCCT TCGTACTGCC AGATACCGAT ACGCGGCTTC TCTCGAAGAA CTGCGGACTT CCGTTTCGGA GGTGGGAATT CCCTGCGTGG TGAAACCGCT GATGAGCTCG TCGGGCAAGG GGCAGTCAAC GGTTAAAACA GAAGAGGATA TTGAACGCGC ATGGAGCTAT TCGCAGAGCG GTCGGCGCGG GGATATTGCC GAAGTGATCG TGGAGGCTTT TGTGCCGTTT CATACCGAGA TCACCCTGTT GACCGTAACG CAGAAAAACG GCCCGACGCT GTTCTGCCCG CCCATAGGGC ACCGTCAGGA GCGGGGCGAT TATCAGGAGA GCTGGCAGCC CTGCCGAATC GCGGATGCGC AGTTGCATGA GGCTCGGGAG ATCGCTGAAA ACGTAACTCA TTCGCTGACA GGCGCGGGTA TCTGGGGTGT GGAGTTTTTC CTTGCCGATG ACGGGCTCTA TTTTTCGGAA CTCTCGCCCC GTCCGCACGA TACCGGCATG GTGACGCTGG CTGGTACGCA GAATCTCACG GAGTTCGAGC TTCATGCCCG TGCTGTGCTC GGGCTTCCGA TTCCGGAAAT CGAATTGCTG CGGGTGGGCG CAAGTGCGGT TGTTCTTGCC GGCAGCGAGG GGGAGAACCC CGTCTATACC GGTCTGGAGG ATGCCCTCAG GCAGGCCGGT ACCGACATCC GCATTTTCGG AAAACCGACA TCACGCCCAT ACAGGCGAAT GGCCGTGACT CTGGCTTACG ACCGGCCGGG AAGCGATGTC GACGCAGTGA AAGAAAAAGC TGTCGCCAAT GCAGGTAAAG TTAGGGTAAT AAGCGAGCAG ACGTCCGGGT TCCCGTCAGG CAAGGGATAG
|
Protein sequence | MMKTIMLLGS GELGREFVIA AKRLGQYVIA VDSYNNAPAQ QVADEREVID MLDGNALDAL VARHRPDMIV PEIEAIRTER FYDYEEQGIQ VVPSARAANF TMNRKAIRDL ASKELGLRTA RYRYAASLEE LRTSVSEVGI PCVVKPLMSS SGKGQSTVKT EEDIERAWSY SQSGRRGDIA EVIVEAFVPF HTEITLLTVT QKNGPTLFCP PIGHRQERGD YQESWQPCRI ADAQLHEARE IAENVTHSLT GAGIWGVEFF LADDGLYFSE LSPRPHDTGM VTLAGTQNLT EFELHARAVL GLPIPEIELL RVGASAVVLA GSEGENPVYT GLEDALRQAG TDIRIFGKPT SRPYRRMAVT LAYDRPGSDV DAVKEKAVAN AGKVRVISEQ TSGFPSGKG
|
| |