| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1698 |
|---|
| Symbol | |
|---|
| ID | 6354005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1867275 |
|---|
| End bp | 1868576 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642669303 |
|---|
| Product | Xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_001943719 |
|---|
| Protein GI | 189347190 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCTT TTTTCAACTT TCAGGCCCAC CGAACCAGTT ACCGGCAGGA AACGCTGGCA
GGCATAACAA CGTTCTTTAC GCTTTCCTAT ATCATCATCG TCAATCCTGC TATTCTTGCG
GCAGCCGGAA TCCCGAAAGG GGCTTCGATG ACAGCAACCA TACTTACCGC GATTTTCGGA
ACCATTCTGA TGGCCGTCTA TGCAAAACGA CCATTTGCCG TGGCACCTTA CATGGGAGAA
AACGCCTTTA TCGCCTATAC GGTAGTTCAG ACCATGGGGT ACTCGTGGCA GACTGCCATG
GCGGCCATCT TCATCAGCGG GGTGCTCTTT ACCCTAATCA CGCTCGGGGG ACTCCGTCAG
TGGCTGGCAA AATCGATTCC GCGATCGCTT AAACACAGCT TTTCTGCCGG AATAGGCCTT
TTTCTGGCCT TTCTCGGCCT TAACGACATG GGAATCGTTG CACTTGGCGT ACCCGGAGCA
CCGGTAAAAC TTGCCAATCT GGCAAAACCG GAAATACTCA TCAGTCTCGG AGGTCTGCTC
TTCACGGTCA TGCTCCTTGT CCAACGGGTT CCGGGTGCCA TACTTGCCGG CATGGCCTCC
ACAACTGCCG CGTGCATCAT GTTCGGACTT GTTCCGCTGC CGGCGAGCAT TTTCAGCATG
CCCCCGTCGA TATCTCCGAT TTTCATGAAC ATCGATATGC AGGGAGCTCT TACCTGGGGA
TTCACCGGCG TCATTGTCAG CACATTGGTC ATGGACTTTG TCGATACCAT GGGAACACTC
TTCGGGCTCT CTTCACGCGC AGATCTGCTT GATGCCGATG ACAACCTTCC TGAAATCGAA
AAGCCCATGC TGGTTGACGC GCTATCGACT GTTGCAGCCT CTCTTCTGGG AACCACAACC
GCAGGAGTCT ATATAGAATC GGCAGCGGGT ATAGAACAGG GTGGCAAAAC CGGGTTCACG
GCATTGGTGG TAGCCATGCT GTTTTTTCTG GCGCTTTTTT TTTCCCCGAT ACTGACTATC
GTACCTCCGT ATGCATACGG ACCTGCACTG GTGATTGTAG GCATGTTCAT GATACAATCG
ATCACAAAAC TTGATTTCAA TGATTACAGC GAACTGCTGC CGGCATTTCT CACCATTACG
CTCATCATTT TTACCTACAA TATCGGTGTG GGAATTACAG CCGGATTTAT TACCTATACA
ATCATAAAAA CATGTACCGG CAGAATAAGG GAGGTGCATC CCGGCATGTG GATTCTTGCC
CTTTTTTCTC TGACCTTTTA TCTCTTCTAT CCTTACCATT GA
|
|---|
| Protein sequence | MQSFFNFQAH RTSYRQETLA GITTFFTLSY IIIVNPAILA AAGIPKGASM TATILTAIFG
TILMAVYAKR PFAVAPYMGE NAFIAYTVVQ TMGYSWQTAM AAIFISGVLF TLITLGGLRQ
WLAKSIPRSL KHSFSAGIGL FLAFLGLNDM GIVALGVPGA PVKLANLAKP EILISLGGLL
FTVMLLVQRV PGAILAGMAS TTAACIMFGL VPLPASIFSM PPSISPIFMN IDMQGALTWG
FTGVIVSTLV MDFVDTMGTL FGLSSRADLL DADDNLPEIE KPMLVDALST VAASLLGTTT
AGVYIESAAG IEQGGKTGFT ALVVAMLFFL ALFFSPILTI VPPYAYGPAL VIVGMFMIQS
ITKLDFNDYS ELLPAFLTIT LIIFTYNIGV GITAGFITYT IIKTCTGRIR EVHPGMWILA
LFSLTFYLFY PYH
|
|---|
| |