Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1677 |
Symbol | |
ID | 6353984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1843762 |
End bp | 1845579 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642669282 |
Product | GTP-binding protein LepA |
Protein accession | YP_001943698 |
Protein GI | 189347169 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCTGC CTTCCCAGGA AGTGAGCCGC ACGCGCAACT TCTGCATTAT CGCACATATC GATCATGGCA AATCAACCCT TGCCGACAGG CTTCTTGAGG TAACCCATAC GCTTGACCGA ACTCAGATGA GCTCGGCACA GGTGCTCGAC GATATGGATC TTGAAAAGGA GAGGGGCATT ACCATTAAAA GTCATGCTGT CCAGATGAAA TTCAAGGCGG AGGACGGTCA GGAGTACATT CTGAATCTCA TCGATACTCC AGGGCATGTG GATTTCAGTT ATGAGGTTTC CCGTTCGCTT GCCGCCTGTG AAGGGGCTCT GCTTATTGTT GATGCGACTC AGGGGGTCGA AGCGCAGACC ATTGCCAATC TCTATCTTGC CATCGAAGCC GGACTTGAAA TTATTCCGGT GATGAATAAA ATCGATCTGC CCTCATCTGA TGTTGAAGGG GTCGCTTCCC AGATTATCGA TCTTATCGGT GTCGAGCGGG ATGAAATCCT TCAGGTTTCA GCAAAGGCCG GTACAGGAAT CGATAAACTC ATGGATGCCA TTATCGCCAG GATTCCTTCG CCGAAAGATA ACAAGCATCT TCCCTTGAGG GCCCTGATTT TTGATTCGGT TTTCGATCCC TATCGAGGAG CTGTTGTCTA TCTGAGAATT GTTGACGGAG TTCTCAACAA GGGAGACCGT GTTCGTTTTT TCGCCAATGA TCACATCTAT ACTGCCGACG AGATCGGGAC GATGAGTCTG AAGCGTCAGC CGAAAGAGAC GCTTGCTTCT GGTAACGTAG GTTATCTGAT CTGTTCCATC AAGGATGTCA AGGATGCCAA GGTAGGCGAT ACGGTTACCC ATGCAGACAC TCCTGCATCC GAACCGCTTT CCGGATACAA GGATGTAAAA CCGATGGTTT ACAGCGGTCT CTATCCGGTA AATTCAAATG AATTCGAGGA TCTGAGGGAG TCGCTCGAAA AGCTTTCCCT TAACGATGCT TCGCTTGTTT ATACACCCGA GACCTCTGTC GCACTTGGTT TCGGTTTCCG CTGCGGTTTT CTCGGTCTGC TCCATATGGA GATCATTCAG GAGCGCTTGG AGCGGGAGTA TGGGGTAAAC ATCATTACGA CGGTTCCAAA CGTCGAATAC CGTGTCATAC TCACCAATTC GGATGTTATC GAGGTCGATA ATCCGTCTAA AATGCCGGAT ACGACAAAAA TAAACCATGT TGAAGAGCCT TATGTCAGTA TGCAGATCAT TACGCTTTCC GAGTATATCG GCAACATCAT GAAGCTTGGT ATGGAACGGA GAGGAGAATA TAAGAATACG GATTATCTCG ATAGTTCGCG GGTGATCATG CACTTTGAAT TTCCTCTTGG TGAGATTGTT TTTGATTTTC ATGATAAGCT CAAATCCATT TCCAAAGGGT ATGCTTCTAT GGATTATGAG TATATCGGCT ACAGGGAATC AGACCTTGTC AAGCTCGATG TGCTGCTCAA CGGTGAACCG GTCGATGCGC TTTCGATCAT CGTTCATCGT TCGAAAGCCT ATGAGTGGGG CCGAAAACTC TGCCAGAAAC TGAAGGGCAT CATTCCGAAA CAGATGTATG AAGTCGCTAT TCAGGCGGCA ATCGGCAGCA GGGTTATTTC ACGGGAGACC ATTTCAGCTA TGCGCAAGAA CGTTCTTGCC AAATGTTACG GCGGAGATAT CAGCCGTAAA CGAAAGCTTC TGGAAAAGCA GAAGGAGGGC AAGAAACGTA TGAAGCAGGT CGGCAGGGTC GAGGTGCCGC AGGAGGCATT TCTTGCCATT CTCAATATTG ATGAGTGA
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Protein sequence | MALPSQEVSR TRNFCIIAHI DHGKSTLADR LLEVTHTLDR TQMSSAQVLD DMDLEKERGI TIKSHAVQMK FKAEDGQEYI LNLIDTPGHV DFSYEVSRSL AACEGALLIV DATQGVEAQT IANLYLAIEA GLEIIPVMNK IDLPSSDVEG VASQIIDLIG VERDEILQVS AKAGTGIDKL MDAIIARIPS PKDNKHLPLR ALIFDSVFDP YRGAVVYLRI VDGVLNKGDR VRFFANDHIY TADEIGTMSL KRQPKETLAS GNVGYLICSI KDVKDAKVGD TVTHADTPAS EPLSGYKDVK PMVYSGLYPV NSNEFEDLRE SLEKLSLNDA SLVYTPETSV ALGFGFRCGF LGLLHMEIIQ ERLEREYGVN IITTVPNVEY RVILTNSDVI EVDNPSKMPD TTKINHVEEP YVSMQIITLS EYIGNIMKLG MERRGEYKNT DYLDSSRVIM HFEFPLGEIV FDFHDKLKSI SKGYASMDYE YIGYRESDLV KLDVLLNGEP VDALSIIVHR SKAYEWGRKL CQKLKGIIPK QMYEVAIQAA IGSRVISRET ISAMRKNVLA KCYGGDISRK RKLLEKQKEG KKRMKQVGRV EVPQEAFLAI LNIDE
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