Gene Clim_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1609 
Symbol 
ID6354257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1740687 
End bp1741529 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content48% 
IMG OID642669210 
Productglycosyl transferase family 2 
Protein accessionYP_001943632 
Protein GI189347103 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00100883 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTTT CCAATAACCG GCCGCTGGTT TCGGTCACTG TTCCTATGTA CAATAACTCC 
CGTTTTATCG GCGATACCAT CCGTTCGATT CTCGGGCAGT CGTTTTCCGA TTTCGAACTT
CTGATATACG ATGATCAATC AACCGACGAT TCGTTTGATA TTGCAGCATC ATTTTCCGAT
TCTCGTATAA AGCTTTTCAG AAACCCTGTC AATCTCGGAC CTGAGCAAAA CTGGAACCGG
GCGATCAGCG ATGTCAGGGG CAGGTATGTC AAGCTCGTTT GCGGAGATGA TATTCTCTTT
CCGGAATGTA TCGAGAAGCA AATCGCTGTT CTTGACAGTT CCGCTTCTGC TGGAATAAGT
CTTGTGAGCT GTCCCCGCAC CATCATCGAT TCTGAAGGGA AATCGCTCAT TAAAAAAGTC
AACTTTGTCG CGAAAGGCCG TAACGAAGCG GTTGACGTGA TCAGAAAAAT GATCCGCATG
GGCACCAATA TCATCGGCGA GCCGGTATGT GGCCTCTATC CTGCGGAACT CATCGGAAAA
ATAAACGGTT ACAGTGCCGT TGTGCCATAT ACCATCGATC TCGATTTCTG GATACAACTA
CTCAAACACG GCGATCTCTA TATGATCGAC GAACCGCTCT GCGCATTTCG TATTTCAAAT
GTTTCCTGGT CGTCGAGAAT AGGTGAGATG CGTCAGCAAC AGTTTCTTGA GTTCATGGAA
CAGGTGGCAT CGGACAAGCG CCATGAAGTA ACCGACCTCG ATATGTTTAT CGGCCGCATC
AATTGTGCCG TCCAGTCCAT GACCAGTCTC ATGGGCTTCA AGCTGTTCGC CAGCCACGAG
TAA
 
Protein sequence
MMFSNNRPLV SVTVPMYNNS RFIGDTIRSI LGQSFSDFEL LIYDDQSTDD SFDIAASFSD 
SRIKLFRNPV NLGPEQNWNR AISDVRGRYV KLVCGDDILF PECIEKQIAV LDSSASAGIS
LVSCPRTIID SEGKSLIKKV NFVAKGRNEA VDVIRKMIRM GTNIIGEPVC GLYPAELIGK
INGYSAVVPY TIDLDFWIQL LKHGDLYMID EPLCAFRISN VSWSSRIGEM RQQQFLEFME
QVASDKRHEV TDLDMFIGRI NCAVQSMTSL MGFKLFASHE