| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1598 |
|---|
| Symbol | |
|---|
| ID | 6354246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 1720392 |
|---|
| End bp | 1721372 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642669200 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_001943622 |
|---|
| Protein GI | 189347093 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATA ACAGTAAACA TGATCCGGGT TTTTCTGCAT TGCGAAGAAA AGCCGAAAAA
CGCCTCCAGT CGGTTCAGCA AAACCAAACT GACGGGTCTC CCTCATATTA TGAAATGCAG
CATCTCATTC ATGAACTGGA GATTCACAAG ATCGAGCTTG AAATGCAGCA GGAGGAGTTG
CTTCAATCGA GAGCGGATGT CGAGAAAGGG CTGGAACGCT ATACCCAATT GTATGATTTC
GCCCCACTGG GTTATCTGAC GCTGTCCAGG AATGGGACAA TAATCGACGC AAACCTGGTC
GGAGCTGCAA TAATCGGTCA GGAACGTTCT CTTTTGCATG GCGATCGTTT CGGGAGATTT
GTTGCCGATG AGGATATTCC TGTTTTTAAC GCCTTGCTCG ACAGGGTTTT CAGCAAGAGA
GACCCCTGGT ATTGCGAGGT CAGGCTTCTG AATGATCAAC CCTCGCAGCT GTTGTTTGAA
CCATCTTCGA CCAGGAATAC AGGTAATGCA AATCATCGTA CCATTCGTAT CGAAGCAGTT
CTCAGTAATG ACGGGCAGGA GTGCAGGATT GTCGTATCGG ATATCACAAA CCAGAAACAG
CTCAAGCAGA TCGAAGGCGC AACAGGGATA CAGAAGCAGG AAACAACCGG CAGTCCGGCA
GATGGGGGTT CTGATGATTT CAACCATCAG TTGCTCGACA AGGTTATTCA TTCAAGAATA
CGGTTTTCGG TGCTTTCGTA TCTTAACTCG GTCGAACGGG CAGCTTTTGT TGAAATCAGG
GAAAAGATAA AGGCCACAGA CGGGAATCTG AGCATTCACA TGAAAATGCT TGAGACCGCA
GGGTATGTCA GTTTCATAAA GGGGTTTCAT GCAAGAAGAC CGCAAACCAT TTACAGGATC
ACCAGGGAGG GGCGTGATGC CTTTAACCGC TACACAAAGA TAATTTCGGA GCTTCTTGTC
GAGAGGAATC CGGATTCCTG A
|
|---|
| Protein sequence | MNNNSKHDPG FSALRRKAEK RLQSVQQNQT DGSPSYYEMQ HLIHELEIHK IELEMQQEEL
LQSRADVEKG LERYTQLYDF APLGYLTLSR NGTIIDANLV GAAIIGQERS LLHGDRFGRF
VADEDIPVFN ALLDRVFSKR DPWYCEVRLL NDQPSQLLFE PSSTRNTGNA NHRTIRIEAV
LSNDGQECRI VVSDITNQKQ LKQIEGATGI QKQETTGSPA DGGSDDFNHQ LLDKVIHSRI
RFSVLSYLNS VERAAFVEIR EKIKATDGNL SIHMKMLETA GYVSFIKGFH ARRPQTIYRI
TREGRDAFNR YTKIISELLV ERNPDS
|
|---|
| |