| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1586 |
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| Symbol | lysS |
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| ID | 6354234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 1707578 |
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| End bp | 1709101 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642669188 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001943610 |
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| Protein GI | 189347081 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX
[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAAAG AGAACCAGCA CCAGGAACAA CCTCAGCAAC TCTCGCTCAA CGACCAGATG
CAGCGCCGCC ATGAAGAGCG CCGACACCTT GCGGAATCAG GAATCAATCC CTATCCCTGC
ACCTTCGACG TAACGGCCTG TTCAACCGAT ATCACCACCT CATTTCAGGA TGAACAGCGT
AAACAGGTAT CGGTTGCCGG CAGGATCATG ACCATACGAA AAATGGGAAA AGCCTCTTTT
TTCCATATCC AGGACTCAAA AGGACGAATT CAGGTCTATC TGAAGAAAGA CGATGTCGGA
GAAACCGCGT ACAACACCTT CAAGCTGCTG GATATCGGCG ATATCGTCGG AGTGAAAGGG
TTTACCTTCA GAACGAAAAC CGGCGAAATC TCCGTCCATG CCGAAACGTT CGAGCTGCTC
AGCAAATCGT TGCGTCCTAT TCCGGTAGCC AAAGAGAAGG ATATAGACGG TCAGAAAGTG
GTATATGACG CCTTCAGCGA CAAGGAGCTT CGTTACCGCC AGCGTTACGT CGACCTGATC
GTCAATCCCG AAGTGAGGGA AACCTTCATC AAACGCTCGG CAATCGTCAC ATTCATGCGC
CAGTTCTTTA CCGGGAAGGG ATGGCTTGAA GTTGAAACCC CGATTCTGCA GCCGATCTAC
GGAGGAGCGG CGGCCAGACC GTTTACGACC CACCACAACG CTCTTGACAT GCAGCTCTAT
CTGCGCATAG CCAACGAGCT CTATCTCAAA CGCCTCATCG TTGGCGGGTT TGACGGTGTT
TTCGAGTTCG CCAAGGATTT CCGCAACGAA GGCATAGACC GCTTCCACAA TCCTGAGTTC
ACCCAGGTTG AGCTCTATGT AGCCTACAAG GACTACAACT GGATGATGGA ACTTGTCGAG
GAGCTGCTCT ACCGAACCAC TCTCAGCGTC AACGGGACGC ACACCACCAG TTTCCTCGGT
AATGATATCT CCCTTGAACC GCCATTCAGA CGCTTGACCA TTGTCGACGC GATCAAGGAG
TACTGCAATG TGGACGTCAG CGGCAAAAAC GAAACCGAAC TGCGTTCTGC GGCCAAGGAT
CTCGGTCTGG AACTCGACCC GAAAATCGGT GCGGGAAAAA TCATCGATGA AATCTTCGGC
GAATTTGTAG AGCCGAAGCT CATTCAGCCG ACCTTCATTA CAGACTACCC GACCGAAATG
TCGCCGCTTG CCAAGGAACA CCGCTCGAAA CCCGGCTTCG TCGAACGGTT CGAACTGATA
GCCGGCGGAA AGGAACTCTG CAACTCTTTC TCTGAGCTGA ACGATCCGGT CATCCAGCGC
GAGCGACTCG AATCGCAGGC GAAGCTGCGC CTTCGCGGCG ATGAGGAAGC CATGGTGGTG
GATGAGGATT TCCTCCGGGC TCTCGAATAC GGCATGCCGC CCTGCGCCGG GCTCGGTATA
GGCATCGATC GGGTAGTCAT GCTGATTACC GGACAGGAAT CAATTCGTGA TGTGATTTTT
TTCCCGCATC TGAAACCGGA ATAG
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| Protein sequence | MPKENQHQEQ PQQLSLNDQM QRRHEERRHL AESGINPYPC TFDVTACSTD ITTSFQDEQR
KQVSVAGRIM TIRKMGKASF FHIQDSKGRI QVYLKKDDVG ETAYNTFKLL DIGDIVGVKG
FTFRTKTGEI SVHAETFELL SKSLRPIPVA KEKDIDGQKV VYDAFSDKEL RYRQRYVDLI
VNPEVRETFI KRSAIVTFMR QFFTGKGWLE VETPILQPIY GGAAARPFTT HHNALDMQLY
LRIANELYLK RLIVGGFDGV FEFAKDFRNE GIDRFHNPEF TQVELYVAYK DYNWMMELVE
ELLYRTTLSV NGTHTTSFLG NDISLEPPFR RLTIVDAIKE YCNVDVSGKN ETELRSAAKD
LGLELDPKIG AGKIIDEIFG EFVEPKLIQP TFITDYPTEM SPLAKEHRSK PGFVERFELI
AGGKELCNSF SELNDPVIQR ERLESQAKLR LRGDEEAMVV DEDFLRALEY GMPPCAGLGI
GIDRVVMLIT GQESIRDVIF FPHLKPE
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