| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1585 |
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| Symbol | |
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| ID | 6354233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 1706574 |
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| End bp | 1707503 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642669187 |
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| Product | Squalene/phytoene synthase |
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| Protein accession | YP_001943609 |
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| Protein GI | 189347080 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTACC ATTATAATGG ACAAACCGCC GTGCAAGGGA AAGAAAAGGC GCTCACCCTT
GAAAATGCAT ATCGATACTG CCGTCAGATA TCAAAACATC ACGCAAAAAC CTTTTATCTG
GCAACCCTTT TTCTGCCTAA ACGACAACAG AATCCAATAT TCGCCATCTA TGCCCTGCTA
CGAACTGTTG ACGATCTGGT AGATCTTGCC GAAGACAAGC TCACCAACGG CCAGATAACC
CGTCAGGAAA TCAACAGCTT GCTGGAAAAC TGGAAAATCA GGCTGAAACA GTGCTACCGA
GGAGAAGTGA GCCGCGACCC CATCATGATG GCATGGCACG ATACCCTGAA AACCTATCCC
ATACCTATCG AACTCCCGCT CGACCTTATG GACGGCGTCG CCATGGACAT CGAATTCAAG
AAGTTTGAAA CCTTTGACGA CCTTTATGTG TACTGTTACA AAGTCGCTTC AGTCGTAGGG
CTCATGACAT CGGAAATTTT CGGATACAGC GACCGTCAGG CACTGCAGCA TGCCATAGAT
CTCGGTATTG CCATGCAGCT CACCAATATT CTTCGAGACA TCGGTGAAGA TATTGACCGA
GGCAGAATCT ATCTCCCCAT GGAGGATCTG AAAAGATTCG GATACAGCGA GGAAGAGTTC
ATGAAAAAAA CCATGAACCA CAATTTTCTG GCAATGATGA AGTTCCAGAT TGAACGGGCA
AGAAGTTACT ACCGTTCTTC TGAAAAAGGG ATCCCGATGC TTGAAAAAGA GAGCCGTTTT
GCCGTTATGA TCAGCAGTCG GAACTACTGC AATATTCTCC AGGCCATTGA AGAGAACAAT
TACGACGTCT TTTCCCGAAG GGCTTACCGC TCTTTTTATC AGAAAATCCG CACCATTCCG
GAAATCTGGT ATAAAACAAG AGTCTCGTAA
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| Protein sequence | MNYHYNGQTA VQGKEKALTL ENAYRYCRQI SKHHAKTFYL ATLFLPKRQQ NPIFAIYALL
RTVDDLVDLA EDKLTNGQIT RQEINSLLEN WKIRLKQCYR GEVSRDPIMM AWHDTLKTYP
IPIELPLDLM DGVAMDIEFK KFETFDDLYV YCYKVASVVG LMTSEIFGYS DRQALQHAID
LGIAMQLTNI LRDIGEDIDR GRIYLPMEDL KRFGYSEEEF MKKTMNHNFL AMMKFQIERA
RSYYRSSEKG IPMLEKESRF AVMISSRNYC NILQAIEENN YDVFSRRAYR SFYQKIRTIP
EIWYKTRVS
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