Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1572 |
Symbol | |
ID | 6354220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1691791 |
End bp | 1693122 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642669176 |
Product | hypothetical protein |
Protein accession | YP_001943598 |
Protein GI | 189347069 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000183741 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAGC CTGAACGCCG GGATTTTTAT TCTTTTGCAC GTATTGTATC GCTGTTTCTC GGGATTTGCG GGCTCAGTGT GCTGAGCCTC TCTCTCTACT GGAGGGTTGT GGTGCCTGCT GAACCTCATA TGTCAATGCA TTTCAGTCCT GTTTACAAAG AGTTCGTTCT CAGCGGAAGA TGGAGCGGTT CAGTTCCGGA GCCGAATGAC GGACAGCGAT ACTGGAGGGA AGATGGATAT CCTCTCGGCA GGGAGCAGTA TCGTGCAGCG CTACCGTTTC TGTATGTCAG GGACCTTGTC AAGTGGGATG CGTTTCCTGA AACGATCGCA GGTTTGGCAG TTTCTCCGTT CGACGCTGAA CAGTCTTGGC AGTTCATGCG GCTGTTTTCC GAAGACTGGA ATGCTCCTCC ACCGATGCTG CATATGTTCA TTGAGTCGAA ACCTCATGGC GCAAGATTGC AGAAACCGGA TGATTTTTTC AGGGTTTCGT CATCCGGAAA CGGCATTGAA TTCCTGACGC CCCGTGAGGG TAAGGTGGAC AGTCTTAAAA GCAGCAGCTT TACCCGAGCC CTCCGCGCGG CAGGTTTTGT GTTTCCCGTA ATGGAGCTGG GTGGAAATCC TGATGTGAGA AAGCGGTATG ATGCGGGATA TTTTATTGCT GATTCGAAAG GGTTCTTGTT TCAGATGCAG ATGGTTGACG GACAACCATC ATGCCGGCGC CTGCAGCCGC AGATCAGCGG CAAGATAAGG TACATAGCTG TCAACGAGCA TCATCGCGAA GAGTTTTTCG GTTTTGTCGC AACCGATGAC GCCCTGTATG CCATCATGCA GAAGGAGAGA CGGCTCAAGC AGCTGCCGAT CGGGAAATTC GATGCCGATG CGCTCAGACT TGCGATATGG TCCGATATTC TCTACACCTC CGTGTTCATC GAGAGTCCCG GTATGCCGGG GTCGGGAATT GAAGGCATTG CCATGACCCC CGATTTCAAA GTTGTTCGTC GATACGTCCA GGCGCAGGAT TCGGACTATG CTGGTTCAAT GCGCCGGCTC GATACCATCG CCTCTTTTCT TTTCCCGCTG CAGATCGTCA GTGGAATACC GGGGTCTTCC TTCCGAGACA TGCGTGCAGG GCCAGGAGGA GATCTGTCGG CAGTGCTTGC CGGCAGCGTT TTCGCGCTTG TCGCTTTCAT ACGTGTTACC CGGTCAGGAT TCCGAAAGAG TGTGAGGCCG TGGAGCGATT ATGTGTTTGT CGCCGTTTTC GGTTTTGTTG CCATAGCGAT GATACTGATT GAAGACGCCG ACCAACATGT GCGGGTGCTG CATAACAGCT GA
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Protein sequence | MGKPERRDFY SFARIVSLFL GICGLSVLSL SLYWRVVVPA EPHMSMHFSP VYKEFVLSGR WSGSVPEPND GQRYWREDGY PLGREQYRAA LPFLYVRDLV KWDAFPETIA GLAVSPFDAE QSWQFMRLFS EDWNAPPPML HMFIESKPHG ARLQKPDDFF RVSSSGNGIE FLTPREGKVD SLKSSSFTRA LRAAGFVFPV MELGGNPDVR KRYDAGYFIA DSKGFLFQMQ MVDGQPSCRR LQPQISGKIR YIAVNEHHRE EFFGFVATDD ALYAIMQKER RLKQLPIGKF DADALRLAIW SDILYTSVFI ESPGMPGSGI EGIAMTPDFK VVRRYVQAQD SDYAGSMRRL DTIASFLFPL QIVSGIPGSS FRDMRAGPGG DLSAVLAGSV FALVAFIRVT RSGFRKSVRP WSDYVFVAVF GFVAIAMILI EDADQHVRVL HNS
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