Gene Clim_1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1567 
Symbol 
ID6354215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1685499 
End bp1686491 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content51% 
IMG OID642669172 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_001943594 
Protein GI189347065 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA TCCCGTTCCA TGTTTCCCGC AATAGCGTCA GTTTGCTCAA CATCTCTGCT 
GTCCTGCGTA TCGCACTGCT TCTCTTCTTG CTCGCCCCGA CACTTCAAGC CTGTTCTTCC
GACAGGAAAA GCCAACCCGT TGCAACGACA GACACATCGG AAAAAACAGG AGTGCTTCTG
GTGAGCCACG GATCGCCGTC CAAAACCTGG CGCGATGCCC TTTTCGATCT TGAAAAATCC
GTCACGCCGG AAATACTGGC CAACGGCAAC ATTGCCGGCA TTAAAACCGC TTTCATGGAA
TACAATGAAC CATCGATTGC CACGCGCCTG AAAGAGTTCG ACAAGGAAGG GTACTCGGAT
ATCGTCGTTG TTCCTCTTTT TCTGACCGTC AGTCCTCACT CGTTCGACGA TCTGCCGACC
ATAATGGGCC AGAAAGAGGA TCCCCGGTCC ATGGAAACAC TGAAACTCGA AAAGATCGAG
AGGTACAAGC CTGCGGCAGC GATACATATG ACCCCTCTGC TCGATTTCGG CGATGCGCTT
CAGAAGAATG TCGTCAGACG AGTCAAGGGA CTTTCGGCAA ACCCTTCGAG CGAAGGGCTG
ATACTTATCG GCTATGGTGA CGAAGATTAT GAAAAGGAGT GGAACGAGCT GTTTGACAAA
GTCGGCGCTT CGGTAAAACA GGAGACCGGC ATCGATGCAT ATAGTCATGC CTGGTGCGGC
CATATAGTCC GGTACCGCTC CGACTCAACC ACTGCTGCCG TCACAAGAAT GCTGAAACGA
AAACAGCATG CCATTGTCAT TCCGGTGCTC GTCGCCAACG ATGAGAACTT TCAGGTACGA
ATCATCGGCT CGGGTCTTGA AAAAGCATCC GCAGACAAAA ACAGAATTCT TTACAAACCG
GATGCGCTAC TCCCCGATCC ATCTATCGAA GAGTGGATCG TTAGTACCGT AAAAAACACA
ATGGCCGCAA TGACATCGTC ACCGGACAAA TAA
 
Protein sequence
MKFIPFHVSR NSVSLLNISA VLRIALLLFL LAPTLQACSS DRKSQPVATT DTSEKTGVLL 
VSHGSPSKTW RDALFDLEKS VTPEILANGN IAGIKTAFME YNEPSIATRL KEFDKEGYSD
IVVVPLFLTV SPHSFDDLPT IMGQKEDPRS METLKLEKIE RYKPAAAIHM TPLLDFGDAL
QKNVVRRVKG LSANPSSEGL ILIGYGDEDY EKEWNELFDK VGASVKQETG IDAYSHAWCG
HIVRYRSDST TAAVTRMLKR KQHAIVIPVL VANDENFQVR IIGSGLEKAS ADKNRILYKP
DALLPDPSIE EWIVSTVKNT MAAMTSSPDK