Gene Clim_1542 details

Gene Information

• Locus tag: Clim_1542
• ID: 6354189
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 1662324
• End bp: 1662914
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642669148
• Product: 50S ribosomal protein L25/general stress protein Ctc
• Protein accession: YP_001943571
• Protein GI: 189347042
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1825] Ribosomal protein L25 (general stress protein Ctc)
• TIGRFAM ID: [TIGR00731] ribosomal protein L25, Ctc-form

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAACAA TTGCATTAGG GGTGGAACCT CGCGTTATCC GGAAAAAAGA AGCAGCGAAA 
CTGCGTAAGA ACGGTATTGT CCCCGCCGTT ATCTATCATA AAGGCGAAGA AACCGTCGCG 
GTAAGCGTCA ATGAAATTGC ACTGAATAAA CTTGTGCATT CTGCTGAATC ACATATCATC 
GACCTTCAGT TTCCCGATGG CAAAACACTG CGTTCCTTCA TCAAGGACGT TCAGTTCGAT 
CCGGTCAGCG ACCGTATCAT CCATACAGAC TTCCAGCTTT TCGCTGCAGA TGAAGTCGTT 
GAAATGGAGG TTCCCGTAGC GATATCGGGC GACTCTATCG GCGTCGAAAA AGGCGGAAAA 
ATCCTGATTC TTCGGCACGC CCTTACTATT CAGGGATTGC CGGCAAACAT GCCGGATCAC 
GTCACCATCG ATGTGACCAA CCTTGACATG GGTCACATCA TCCACGTACG GGAAATTCCC 
ATGGACGCCT ATACCGGACT CAGCATCATG GACGAGCCGG AAACCCCGGT TATCAGCATT 
GCTCCTCCGA AAAAGGACGC TGAGGCTGAA ACTGAATCGG CTGCCGGTTA A 

 

Protein sequence

METIALGVEP RVIRKKEAAK LRKNGIVPAV IYHKGEETVA VSVNEIALNK LVHSAESHII 
DLQFPDGKTL RSFIKDVQFD PVSDRIIHTD FQLFAADEVV EMEVPVAISG DSIGVEKGGK 
ILILRHALTI QGLPANMPDH VTIDVTNLDM GHIIHVREIP MDAYTGLSIM DEPETPVISI 
APPKKDAEAE TESAAG