Gene Clim_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1541 
Symbol 
ID6354188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1661309 
End bp1662292 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content49% 
IMG OID642669147 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_001943570 
Protein GI189347041 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGACT CAATGGCAAA GCCAATCAAA ATCTTTGCAG GGCGCAGTAA CCCGGCAATC 
GCTGAGAAAA TTGCACGTTA TCTCGGTATG CCTCTCTGCA ATGCAAAAGT CGAAAATTTC 
TCCGACGGAG AAATTTCCGT AAACTATTTC GAGTCGGTCA GGGGATCGGA TCTGTTCATC 
ATTCAATCCA CAAATCCGCC AGCAGACAGC CTCATGGAGC TGCTGATCAT GATCGATGCC 
GCCAGGCGCT CTTCGGCAGC AAGAATTACG GCAGTTCTTC CCTATTATGG TTACGCCCGT 
CAGGACAGAA AAGATAAGCC AAGGGTTGCC ATAACCGCAA AACTCGTCGC AAATCTGCTT 
ACTGAAGCCG GGGCGAACCG CATTCTGACC ATGGATCTGC ACGCACCCCA GATTCAGGGA 
TTTTTCGATA TTCCGTTCGA TCACCTTTAC TCAAGCGTCG TACTGATCGA TCATGTTCGG 
CATAGAGAAT TCCGCGACAA CCTCGTTGTA GCTTCACCGG ATGTTGGAGG AGTGAAACTT 
GCAAGAAAAT TTGCTGAAGA ACTGGGGACC GATCTGGTTA TTGTGGATAA GCGTCGCCCA 
AAAGCCAATG TAGCCGAAGT AATGAACATT ATCGGCGACG TGAACGGCAG AAACGTACTG 
CTTGTAGACG ACATGATCGA TACGGCAGGG ACACTGGTCA ATGCGGCCAA AGCCATTCGT 
GATGCAGGAG GCCTGAAAAT CTATGCTGCG GCGACACATC CTATCCTTTC CGGTCCGGCT 
ATCGAAAGAA TCGACGCTTC GGTTATTGAA AAAGTTATCG TTACCGATTC GGTCGTCACC 
GGCCACGAAT ACTCTTCGAA AATCGAAACG GTTTCGGTAA GCGGTCTGTT TGGAGAAGCC 
ATCAAGCGCA TTTACGAAGA CGACTCCGTA AGCTGTCTTT TCGACAGCAA GAATATCAGT 
CAAAAGATCA CGAACAATCA CTAA
 
Protein sequence
MQDSMAKPIK IFAGRSNPAI AEKIARYLGM PLCNAKVENF SDGEISVNYF ESVRGSDLFI 
IQSTNPPADS LMELLIMIDA ARRSSAARIT AVLPYYGYAR QDRKDKPRVA ITAKLVANLL 
TEAGANRILT MDLHAPQIQG FFDIPFDHLY SSVVLIDHVR HREFRDNLVV ASPDVGGVKL 
ARKFAEELGT DLVIVDKRRP KANVAEVMNI IGDVNGRNVL LVDDMIDTAG TLVNAAKAIR 
DAGGLKIYAA ATHPILSGPA IERIDASVIE KVIVTDSVVT GHEYSSKIET VSVSGLFGEA 
IKRIYEDDSV SCLFDSKNIS QKITNNH