| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1532 |
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| Symbol | |
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| ID | 6354179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 1652988 |
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| End bp | 1654235 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642669138 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001943561 |
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| Protein GI | 189347032 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC AACAACTGCT TCGAAACCGT AAATCCCTGC TGATCGCCAT CCCGCTTCTG
TTAATTGGAA TAGCGCTCCT CATATCTTTT TTCATCTTCA GGGAAAAAGC CGTGGAAGTC
ACAACAGAAA AAACGTTCAG AAAAGAGGTG GTTCATGTGG TCACGGCTAC AGGGAAAATC
GAACCGGAGA CCGAAGTGGC CATGTCGCCC GATGTTTCGG GAGAGATCAT AGAGCTGCCG
GTAAAAGACG GACAGCAGGT CAGAAAAGGG GATCTTCTTT TCAAGATCCA GCCTGACGTC
TATATCAATC AGGTCGAACA GAGCATGGCG CAGCTTAACC TTGCAAAAGC ACAAAGTCTC
GAGGCAAAAT CAAGAAAAAT CAAGGCGGAA GACGATTTTC GGAAAGCATC GCTGCTTTTC
AGAGAAAAGC TGATATCCCA GACGGATTTC CTTGCAGCCA AAACCAATGC CGATGCGGCA
AGTGCATCGT TTGAGGCCTC GACCTACGCA ATCGAACAGT ACAGGAGCCT GTACGATCAG
AACCAGGATC GGATGAGAAA AACCGTTATC CGCGCTCCGA TCGACGGGAC CATCATCAAA
CTCAACAGTA AAACCGGTGA ACGTGTGGTA GGAACCGGAC AGTTTCCCGG AACCGAGGTG
CTCGGACTGG CAAACCTCGA CAGCATGCAG GTCGAGGTGG AAGTCAATGA AAACGATATT
GTAAATGTCA GAAAAGGCAA TCCGGTAGCA ATAACGGTCG ATGCTTTCGG GGATCGCATC
TTCAGAGGTG TTGTGCATGA AATTTCGAAC TCGGCGATCT CTCAGGCTGC AGGAACTCAG
GAGGAGGTGA CGAATTTTTC GGTCAAAATA CGAATACTTA ACCACATGCG CCTTCTTAAG
CCGGGGATGA GCGCAACAGC CGACATCGAG TCCATACGGG TAAAAAATGC GCTTGTTGTG
CCAATACAGA GCGTTACCGT GAGAACACCA CAGGGCAAAA AAGCCTCCCG AAAGGATGAT
AAGGAACCGG AGGAAAAACA GACTCGAGAA ATCGAAAGCG TTGAAGGCGT CTTTATAGCA
AAAAACGGCA AGGCTGTATT CCGAAAGGTG AAGACCGGAA CGGCCGACAA CACTCATATC
ATTATACTTT CGGGACTTAA TGCTGGTGAA GATGTCGTTT CCGGCAGCTA TACGGCAATT
ACCTCGCTGC TCTATGACGG TTGCAGCATC AAAACCCCGA AACGGTAA
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| Protein sequence | MKKQQLLRNR KSLLIAIPLL LIGIALLISF FIFREKAVEV TTEKTFRKEV VHVVTATGKI
EPETEVAMSP DVSGEIIELP VKDGQQVRKG DLLFKIQPDV YINQVEQSMA QLNLAKAQSL
EAKSRKIKAE DDFRKASLLF REKLISQTDF LAAKTNADAA SASFEASTYA IEQYRSLYDQ
NQDRMRKTVI RAPIDGTIIK LNSKTGERVV GTGQFPGTEV LGLANLDSMQ VEVEVNENDI
VNVRKGNPVA ITVDAFGDRI FRGVVHEISN SAISQAAGTQ EEVTNFSVKI RILNHMRLLK
PGMSATADIE SIRVKNALVV PIQSVTVRTP QGKKASRKDD KEPEEKQTRE IESVEGVFIA
KNGKAVFRKV KTGTADNTHI IILSGLNAGE DVVSGSYTAI TSLLYDGCSI KTPKR
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