Gene Clim_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1521 
Symbol 
ID6355778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1642459 
End bp1643784 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content49% 
IMG OID642669127 
Productribonuclease BN 
Protein accessionYP_001943550 
Protein GI189347021 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00169169 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTCG GAGCCGAACC CAAGGCGGCT GTTCGGGAGA CCGTAAAGAG GAACATTATG 
ACATTACAGC CAGTTGACGT TACTTGGCGT TTTGCGGGAC TTCAGGAATA TTTTCGCAAG
CTGATGCCGT TTTTTTTAAA AAACCTTCGG CATGACAAGA TTTTTCTGAG CGCAGGCTCC
CTTGCGTTTC AGACGCTTCT TTCAATCGTG CCATTTCTGG CAGTAACCCT CTCAGTGCTC
AGGATTTTTT CGTTTTTTGC CAGTCTGAAC CGTTATCTCG AAGAGTTTAT TTTCCAGAAC
TTCATTCCCT CAGCCGGAGA AGATCTCAGA ATCCATTTTG AAGCGTTTAT CGGTAAAACC
TCCACGGTTC CGCTTATCGG AGGTCTGCTG CTCTTTATCA TAGCGCTCTC GCTTATTTCC
ACGATAGATC GTACGCTCAA CGATATATGG AAAGTTCGCG CCCCCAGAAA GCCTATCCAG
GCATTCACGC TTTACTGGAC GGTGCTTACG CTCGGTCCCG TACTGATAGG CAGCAGCCTG
GGTGCAAGTT CCTATGTATG GTATACCGTT TTTACCGAAG GACCGTTGCT TGAACTGAAA
ATACGACTGA TCTCCTTTCT CCCTTTTGTG AACTCGCTGC TCTCTTTTCT GCTGCTCTAT
ATGCTGGTAC CGAACCGGCG GGTCAAATTA CCGCATGCTT TTTCAGGGGC TGTGGCCGCC
GCACTTCTTT TTGAGCTTTC TAAAAAATGG TTTGTGTTTT ATGTCAGCCG CTTTGCTACA
TTTGAGCATA TCTACGGGGC CATCTCAGCC GTTCCGCTGC TTTTTTTCTG GATTTATATC
GGATGGCTTG TCGTGCTGAC CGGAGCCGAA CTTGTATTCA GCATAGGAAA CGTGCTTTCT
TCATCGGTGG AGCCTGTTCC TAAACGCCTG CTTCCCGGAC TGACGCAACT GTTTTCAGTG
CTTGGCACGA TCTGGCGCGC ACAGCAGGAC GGGTCGCCGG TTCACATCGG AACCAGGGTT
GTGAGGGGAG CCTTGTCTGC GACAGCAGCG GACAGAATCG TTGATCTGCT GTTGCAGAAA
GGGGTGGTGC ACGAGACATC GGGAGGTGAG CTTGTCGTCA GTGCGGATCT ATACCAAATG
ACCTTGTTCG ATCTCTATGG CCTCATACCC TGGGAGCTTG CGGTACATGA AGATCTTGAA
GGATATGATG ATGACGGTTC GGAGACGTTC GCTTCATTGG AAAAAGATGT GACGGTATGC
CTTAAGGAAA CGATGGCTGT TCCCGTTGCC TTACTTTTAC AGGATTCAAC TAATCAGTGC
ATATGA
 
Protein sequence
MAVGAEPKAA VRETVKRNIM TLQPVDVTWR FAGLQEYFRK LMPFFLKNLR HDKIFLSAGS 
LAFQTLLSIV PFLAVTLSVL RIFSFFASLN RYLEEFIFQN FIPSAGEDLR IHFEAFIGKT
STVPLIGGLL LFIIALSLIS TIDRTLNDIW KVRAPRKPIQ AFTLYWTVLT LGPVLIGSSL
GASSYVWYTV FTEGPLLELK IRLISFLPFV NSLLSFLLLY MLVPNRRVKL PHAFSGAVAA
ALLFELSKKW FVFYVSRFAT FEHIYGAISA VPLLFFWIYI GWLVVLTGAE LVFSIGNVLS
SSVEPVPKRL LPGLTQLFSV LGTIWRAQQD GSPVHIGTRV VRGALSATAA DRIVDLLLQK
GVVHETSGGE LVVSADLYQM TLFDLYGLIP WELAVHEDLE GYDDDGSETF ASLEKDVTVC
LKETMAVPVA LLLQDSTNQC I