Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1521 |
Symbol | |
ID | 6355778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1642459 |
End bp | 1643784 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642669127 |
Product | ribonuclease BN |
Protein accession | YP_001943550 |
Protein GI | 189347021 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00169169 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGTCG GAGCCGAACC CAAGGCGGCT GTTCGGGAGA CCGTAAAGAG GAACATTATG ACATTACAGC CAGTTGACGT TACTTGGCGT TTTGCGGGAC TTCAGGAATA TTTTCGCAAG CTGATGCCGT TTTTTTTAAA AAACCTTCGG CATGACAAGA TTTTTCTGAG CGCAGGCTCC CTTGCGTTTC AGACGCTTCT TTCAATCGTG CCATTTCTGG CAGTAACCCT CTCAGTGCTC AGGATTTTTT CGTTTTTTGC CAGTCTGAAC CGTTATCTCG AAGAGTTTAT TTTCCAGAAC TTCATTCCCT CAGCCGGAGA AGATCTCAGA ATCCATTTTG AAGCGTTTAT CGGTAAAACC TCCACGGTTC CGCTTATCGG AGGTCTGCTG CTCTTTATCA TAGCGCTCTC GCTTATTTCC ACGATAGATC GTACGCTCAA CGATATATGG AAAGTTCGCG CCCCCAGAAA GCCTATCCAG GCATTCACGC TTTACTGGAC GGTGCTTACG CTCGGTCCCG TACTGATAGG CAGCAGCCTG GGTGCAAGTT CCTATGTATG GTATACCGTT TTTACCGAAG GACCGTTGCT TGAACTGAAA ATACGACTGA TCTCCTTTCT CCCTTTTGTG AACTCGCTGC TCTCTTTTCT GCTGCTCTAT ATGCTGGTAC CGAACCGGCG GGTCAAATTA CCGCATGCTT TTTCAGGGGC TGTGGCCGCC GCACTTCTTT TTGAGCTTTC TAAAAAATGG TTTGTGTTTT ATGTCAGCCG CTTTGCTACA TTTGAGCATA TCTACGGGGC CATCTCAGCC GTTCCGCTGC TTTTTTTCTG GATTTATATC GGATGGCTTG TCGTGCTGAC CGGAGCCGAA CTTGTATTCA GCATAGGAAA CGTGCTTTCT TCATCGGTGG AGCCTGTTCC TAAACGCCTG CTTCCCGGAC TGACGCAACT GTTTTCAGTG CTTGGCACGA TCTGGCGCGC ACAGCAGGAC GGGTCGCCGG TTCACATCGG AACCAGGGTT GTGAGGGGAG CCTTGTCTGC GACAGCAGCG GACAGAATCG TTGATCTGCT GTTGCAGAAA GGGGTGGTGC ACGAGACATC GGGAGGTGAG CTTGTCGTCA GTGCGGATCT ATACCAAATG ACCTTGTTCG ATCTCTATGG CCTCATACCC TGGGAGCTTG CGGTACATGA AGATCTTGAA GGATATGATG ATGACGGTTC GGAGACGTTC GCTTCATTGG AAAAAGATGT GACGGTATGC CTTAAGGAAA CGATGGCTGT TCCCGTTGCC TTACTTTTAC AGGATTCAAC TAATCAGTGC ATATGA
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Protein sequence | MAVGAEPKAA VRETVKRNIM TLQPVDVTWR FAGLQEYFRK LMPFFLKNLR HDKIFLSAGS LAFQTLLSIV PFLAVTLSVL RIFSFFASLN RYLEEFIFQN FIPSAGEDLR IHFEAFIGKT STVPLIGGLL LFIIALSLIS TIDRTLNDIW KVRAPRKPIQ AFTLYWTVLT LGPVLIGSSL GASSYVWYTV FTEGPLLELK IRLISFLPFV NSLLSFLLLY MLVPNRRVKL PHAFSGAVAA ALLFELSKKW FVFYVSRFAT FEHIYGAISA VPLLFFWIYI GWLVVLTGAE LVFSIGNVLS SSVEPVPKRL LPGLTQLFSV LGTIWRAQQD GSPVHIGTRV VRGALSATAA DRIVDLLLQK GVVHETSGGE LVVSADLYQM TLFDLYGLIP WELAVHEDLE GYDDDGSETF ASLEKDVTVC LKETMAVPVA LLLQDSTNQC I
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