| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1516 |
|---|
| Symbol | |
|---|
| ID | 6355773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1635036 |
|---|
| End bp | 1636445 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642669123 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_001943546 |
|---|
| Protein GI | 189347017 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0112694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACCG AACAATCCGA CACAGTGATA TCATCGTTTG CCCCCGCCGC AGGTTATTCC
GAAGAGCTTC TGCACCAGCT CGCATCGAAA CAGAAATCAA GAAAAAAATG GCTGCTGGTT
CAACCGGTCA GCAACACCAG CATGATGGTT GATTCCGGCA CAGTCAGTAT GCCGCTGAAC
CTCATTATGG TTGCCACAAT AGCCGGAAAG CTCTTCGATG TCACGTTTAT CGATGAACGG
CTCGGCGAAC AGGTTCCTGA TGATCTCTCG GGATATGATG TCATAGCAAT CACATCTCGT
ACCCTTAACG CCAGTAAGGC CTACCGCATC GGCGATGCGG CGCTCCGTCA GGGAAAAATC
GTCATTCTCG GGGGCGTGCA CCCTACCATG CTGCACGAAG AAGCTTCACA GCACTGCACC
AGCGTCGTGT ACGGAGAGAT CGAATCGATC TGGACTGAAC TGGCGACTGA CGTGCTTACA
GGAAAAATGC AGCCGATATA CCGGGCAAAA ACGCTCAAAC CGATGAGTGA TATGCACCGC
CCGGATTTCA GTTATGCCCT CAACGCGAAA AACGCGAAAA AATACAGCTC ACTGATCCCC
ATCCTCGCGA CCAAAGGATG TCCGGTCGGC TGTAATTTCT GCACGACGCC TACTATTTAC
GGCAAAAATT ACCGGTACAG GGAACTCGAC CTCGTGCTCG AAGAGATGCG CTACCACCAG
GAACGACTTG GCAAGCAGAA GATCAACTTC TCGTTCATGG ACGACAACAT CAGCTTCAGA
CCGAAGTATT TCATGACGCT GCTCGAAGAG ATGGCAAAGC TCGGCGTGCA CTGGAACGCC
AATATCTCCA TGAACTTCCT CGACAAACCC GAAGTCGCCG AACTGGCCGG ACGTTCAGGC
TGCGACCTTC TCAGTATAGG GTTCGAATCG CTCAATCCAG AAACCCTGAA AAGCGTCCAG
AAGGGTTCCA ACCGTCTCGG CAATTACGAA AAGGTTGTCA GCAACCTGCA TAACAACGGT
ATCGCCATAC AGGGTTATTT CATGTTCGGT TTCGACAACG ATACCGAAGA GAGCTTCCAG
CTCACTTACG ACTTCATCAT GAAAAACCGC ATCGAGTTCC CGGTATTTTC ACTGGTGACG
CCCTTCCCCG GAACGCCCTA CTTCGATGAA ATGAAATCCC GTGTACGACA TCTCGACTGG
GACAAGTACG ACACCTACCA CTATATGTTC GAGCCGAACA AAATGAGCGG CGAAAAACTT
CTCGAAAACT TCGTTAAACT GCAGAAAGAG GTTTACAAGG GCCGCTCGAT CATGCAACGC
ATGAAGGGCA AACCGCTGAA CTGGGTATGG TTCGTGAACT ACATGATGCA CCGCTTCACC
AAAAAGCTCT CGCCGGAATA TTACTACTGA
|
|---|
| Protein sequence | MQTEQSDTVI SSFAPAAGYS EELLHQLASK QKSRKKWLLV QPVSNTSMMV DSGTVSMPLN
LIMVATIAGK LFDVTFIDER LGEQVPDDLS GYDVIAITSR TLNASKAYRI GDAALRQGKI
VILGGVHPTM LHEEASQHCT SVVYGEIESI WTELATDVLT GKMQPIYRAK TLKPMSDMHR
PDFSYALNAK NAKKYSSLIP ILATKGCPVG CNFCTTPTIY GKNYRYRELD LVLEEMRYHQ
ERLGKQKINF SFMDDNISFR PKYFMTLLEE MAKLGVHWNA NISMNFLDKP EVAELAGRSG
CDLLSIGFES LNPETLKSVQ KGSNRLGNYE KVVSNLHNNG IAIQGYFMFG FDNDTEESFQ
LTYDFIMKNR IEFPVFSLVT PFPGTPYFDE MKSRVRHLDW DKYDTYHYMF EPNKMSGEKL
LENFVKLQKE VYKGRSIMQR MKGKPLNWVW FVNYMMHRFT KKLSPEYYY
|
|---|
| |