Gene Clim_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1508 
Symbol 
ID6354824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1625332 
End bp1626033 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content54% 
IMG OID642669113 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001943538 
Protein GI189347009 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA ATAAAGTAAT TCTTATCACT GGAGCCTCTT CGGGAATCGG AATGGCGACA 
GCGCGGCTAA CTGCAAAGGC GGGATACCGC GTTGCTCTTG CAGCACGATC CACGATTAAA
CTAAACGATC TGGCCTGTGA GTTGGGAGAA GAAAACGCTC TTGCCCTGTA TTGCGATGTC
ACTGACTGGA CATCCCAACA GCGCGTCGTT GAAAAAACCC TGGAACGGTT CGGAAGAATC
GATGCCGTAT TTGCCAATGC GGGTCTTTCA AAAGGTTCCC CGTTTTTCGG CGGATCGGAC
AAACCGGAAG AGTGGAAAGA GATGGTACTG GTCAATGTGT TCGGTGCGGC TGCAACGGCA
AGGCTTACAC TCCCTGCACT CACCAAAACA AGGGGACATT TTCTCGTAAC CGGCTCGGTT
GTCGGCCGCA TTACCTCGAT ACGAAACCTC TATTCTGCGA CCAAATGGGC TGTAACCGGC
ATGGCGCAAG CCATTCGCAA CGAAATGACC GAAACCGGCG TACGGGTCAC GCTGATCGAG
CCTGGAGTTG TCGATACGCC GTTCTGGGAT CATCTGCAGA AACCGGGCAC CCCGGAACTG
AAAGCCGAGG ATGTCGCCAG GGCCGTGCTT TACGCTCTTT CGCAACCGTC TCACGTCGAT
GTCAACGAAA TCGTCATTCG ACCGGCCGGA CAGCCTCACT GA
 
Protein sequence
MSENKVILIT GASSGIGMAT ARLTAKAGYR VALAARSTIK LNDLACELGE ENALALYCDV 
TDWTSQQRVV EKTLERFGRI DAVFANAGLS KGSPFFGGSD KPEEWKEMVL VNVFGAAATA
RLTLPALTKT RGHFLVTGSV VGRITSIRNL YSATKWAVTG MAQAIRNEMT ETGVRVTLIE
PGVVDTPFWD HLQKPGTPEL KAEDVARAVL YALSQPSHVD VNEIVIRPAG QPH