| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1507 |
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| Symbol | |
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| ID | 6354823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1622325 |
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| End bp | 1625105 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642669112 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001943537 |
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| Protein GI | 189347008 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGCT CGAAACAGTT CTGTTCGAAG GATACAGGAG ATGTGCCGTC TCGGGAATAC
CTCGTTCAGC TGGCTTCTTC TGCAGAGCCA GGAGCTCAGG CAGAAGAACA GACTGGATTG
CAGAATCGGG ATGCCTATCT CCAGAGTATT CTGAGAGCGA TACCTTCGGG TATCGGTTTG
GTAGTAAATC GCGTTATTAA AGAAGTAAAC CTTCGGTTTT GCGAGATTCT CGGTTATACC
CGAGATGAAC TGGTCAATCA AAGTTCTCGC ATGCTCTATC TTTCTGATGA AGAATATGCG
TACGTAGGTG CTGAAAAATA TCGCCAGATA GCTCAATTCG GCTCAGGAAC CGTTGAGGTT
CGCATGCGGC GGAAAGACGG GCTTATCATC AATACGTTAC TGAGTTCCAC AACGATCGAT
TCTGACGATC TGTCTCAGGG GGTGACTTTT ACCGTTCTCG ATATTACGTC ACTCAAACAG
GCGGAAGCAA TGCTTCGCGA GAGCGAGGAA AAGTATCGCA GCCTGATAGA GCAATCGATA
CAGGGAATGA TCATTGCCCA GGACAATCCT CCGAGAGTCT GTTTTGCCAG CAAACCCATG
GCGGTTATTA TCGGCTATTC TCCTGCAGAG CTCACGAGCT TTTCTTCGAA GGAACTGCTT
GCTCTTGTTC ATCCGGATGA TCGGCAAAGC TATCGCAATG CATTTCATGA CTGCATCAAC
AGCCATCTGC AGCAGATTCG CAGAGAGTTC AGAATGGTAC ACAAAAACGG TAAGATTCGC
TGGGTCGAGT TATTCGGAAC AACCATTCTT TATGAAGGTG ATCCGGCGAT ACAGACCGTC
ATGGTCGATA TAACCGAACG GAAACATGCC GAAGAAGAAC TCGTGAAAAG CGGTGAGAAG
CTGAGCGAGC TTTTTGACAA TATCAGAGAT GGTCTTTTTG TGCACCCGGT GCTTGAGGGC
GGAGTTCCCG GAAAGTTTGA GATGGTAAAT CGTTCAGCAT CGGATATTCT TGGTTACTCG
GAACAGGAGC TTCTCAACAT GTCTCCGCAG GATATATATG CACCGGTATT TCCCTGTACC
GGAATTGACA GGGAGATTAC TCTGCTTAAT GAGCCAGGCA GTCAGATATT CGAGGCCGTT
CAGCGGCATA AAAACGGTAC AAGCGTTCCT GTTGAGGTAA GTACTGGCAG AATAGAGATA
TCCGGGAGGT CAAGCATCAT TTCGACTGTC CGCGATATCA CAACGAGAAA ACGCTCATAT
GAGGAGATGA AAAAAATTAC GACTGCATTA CAGCAGAGCC CTGCAGTTGT CGTTATTACC
AATGCACATG CTGAAATAGA ATATGTCAAT CCGAGATTCT CGGAGTTGAC CGGATTCGCA
GCTGAAGAGG TTTCAGGAAA AAACCCGAAG GTTCTCCAGT CGGGTTTGAT GTCAAAGGAG
ACCTACAGGC AGCTCTGGAT TACGCTGAAA GCCGGGAAAG TATGGCGTGG CGAATTTTTC
AATAAAAAGA AAAACGGAGA ACTCTATTGG GAAAACGCCA TTATCGCTCC GGTAAAAAAC
GAACAGGGTG ATATTACCAA TTATGTGGCC GTGAAAGAGG ATATAACCGA ACGGAAAAGG
CTGTGGAGTG AGCTTGTTGC GGCTAAGGAA AAAGCGGAGG AGAGCGACCG TCTGAAAACA
TGTTTTCTTG AGAATATGAG TCATGAGATT CGTACTCCGA TGAACGGGAT ACTCGGTTTT
TCTGAATTAT TGAAAGAGCC CCTGCTGGAT GGGAGTAAAA AGGACGAATA CATTGAACTC
ATTCATCAGA GCGGCAAGAG GATGCTCAGT ATCATCAATG ATCTTATCGA TATATCCAAA
ATCGAGGCGG GTGAGATTGC CATCCAGTAC ACGGAAGCGT CACTTGACAA AATTTTTCAT
GATCTTCAGG CATTTTTTGA GCCTCAGGCG ACAAGGAAAG GCTTATTGCT TCACTGCACC
GGATGCGTTC CGCCTTCTGC AAGTGTTATT GTTACCGATA AATCAAGACT TGTTCAGATA
CTTACGAATT TGGTTCAGAA TGCATTGAAA TATACTGCAT CAGGGGAAAT CTGTTTTGGA
TGCACTAAAA ATGGAGATTT TCTTGATTTT TATGTCAGAG ATACCGGAAT TGGCATTCCT
GATTTTTTGA CGGAAAAAAT ATTTGACCGT TTCCGGCAGG CTCAGGTTGA TCCCGTTCGT
GAATATGAAG GAGTCGGACT TGGTCTGAGT ATTTCAAAGT CTCTTGTAGA ACTTCTGGGA
GGGCGCATCG GTGTTCAGTC ATCGGCCGGA GAAGGGAGTG TGTTTTCATT TTCGTTGCCC
TACAACAGTG CGGTATCATT ACCAAAAGAA ATCAAGCAAG CCAAAAACCC TGGTAACCGT
ATTTTTAAAA AAAACTTAAC GATACTGGTC GCAGAAGATG ACAACGTCAA CCGGATACTG
CTTGAAAAAG TGCTGACCGG AAGCGGCATT GAAGTCATTT CGGTGATTGA TGGAATAAAA
GCCGTTCAGG CTGTCCATGA TCATCCGAAC ATAAACCTGG TGCTTATGGA TATAAAGATG
CCGAATATGA GCGGCTATGA GGCGTTACAG GAGATCAGGC AGTTCAGGCC TGCCCTGCCG
GTAATTGCCC ATACGGCTTT TGCATATCCC GAAGACAAAA GATATGCCCT GGAAGCCGGG
TTTAATGAAT TTCTTGCCAA GCCGTTTCGC ATGGATGATC TCTTCAACCT TATTCATCTT
TTCTCTGAAC ATGAATCCTG A
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| Protein sequence | MKGSKQFCSK DTGDVPSREY LVQLASSAEP GAQAEEQTGL QNRDAYLQSI LRAIPSGIGL
VVNRVIKEVN LRFCEILGYT RDELVNQSSR MLYLSDEEYA YVGAEKYRQI AQFGSGTVEV
RMRRKDGLII NTLLSSTTID SDDLSQGVTF TVLDITSLKQ AEAMLRESEE KYRSLIEQSI
QGMIIAQDNP PRVCFASKPM AVIIGYSPAE LTSFSSKELL ALVHPDDRQS YRNAFHDCIN
SHLQQIRREF RMVHKNGKIR WVELFGTTIL YEGDPAIQTV MVDITERKHA EEELVKSGEK
LSELFDNIRD GLFVHPVLEG GVPGKFEMVN RSASDILGYS EQELLNMSPQ DIYAPVFPCT
GIDREITLLN EPGSQIFEAV QRHKNGTSVP VEVSTGRIEI SGRSSIISTV RDITTRKRSY
EEMKKITTAL QQSPAVVVIT NAHAEIEYVN PRFSELTGFA AEEVSGKNPK VLQSGLMSKE
TYRQLWITLK AGKVWRGEFF NKKKNGELYW ENAIIAPVKN EQGDITNYVA VKEDITERKR
LWSELVAAKE KAEESDRLKT CFLENMSHEI RTPMNGILGF SELLKEPLLD GSKKDEYIEL
IHQSGKRMLS IINDLIDISK IEAGEIAIQY TEASLDKIFH DLQAFFEPQA TRKGLLLHCT
GCVPPSASVI VTDKSRLVQI LTNLVQNALK YTASGEICFG CTKNGDFLDF YVRDTGIGIP
DFLTEKIFDR FRQAQVDPVR EYEGVGLGLS ISKSLVELLG GRIGVQSSAG EGSVFSFSLP
YNSAVSLPKE IKQAKNPGNR IFKKNLTILV AEDDNVNRIL LEKVLTGSGI EVISVIDGIK
AVQAVHDHPN INLVLMDIKM PNMSGYEALQ EIRQFRPALP VIAHTAFAYP EDKRYALEAG
FNEFLAKPFR MDDLFNLIHL FSEHES
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