| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1494 |
|---|
| Symbol | |
|---|
| ID | 6354810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 1605315 |
|---|
| End bp | 1606736 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642669100 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_001943525 |
|---|
| Protein GI | 189346996 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACA AAATGGAAAA GAGGGCTTAT GATGCCGATC TTGCCGTTAT CGGCTCCGGT
CCGGGCGGAT ATGAAGCGGC CCTGAGAGCT GCCCGCCTCG GAATGAAAGT CATACTTGTC
GAAAAAGGCT CTCCCGGCGG CGTTTGTGTC AACTGGGGAT GCATTCCAAC CAAGGCGCTT
TTGCGCAGCG CCGGTATGTT CGACGACCTT TCAAAAGCCT CCGGTTACGG AGTGCTGCTC
TCCGATCCGG GCTTCGATCT GGCGCAGGCG GTAAAAAGGA GTCGTAATGT TGCCCTGAAG
CTCTCCAAAG GTATCGGGTT CATGCTGAAA AAAGCCGGTG TCGAGTACCG GCATGGAGAA
GCCCGTCTGA GTGCATCCCA TGAAATTTCA GTTATTCGGG ATGGTGAGCA GGTCGGTTCC
TTTACAAGCG AAAACATTAT TATCGCCACA GGCGGACGTT TCAGGGAACT GCCGGGCCTT
GTCCCCGACG GCAGACGCAT CATTACGAGC AGGGAGGCGC TCGCCCTGAA AGATGTGCCT
CGTTCGATGC TTGTGCTCGG AGGAGGCGCT ATCGGTATCG AGATGGCATG GTTTTATGCA
AAAGCCGGAA CGAAGGTAAC CGTCGTTGAA ATGATGCCGC AGATTCTTCC TCTCGAGGAG
GCCGAGATAG CGGAGGGGTT GCGTCGTTCT TTTGAAAAAG CCGGCATAGA AATTCACACA
TCGGCAAAGC TTGAACAGCT TTCATGTCGC GAGTCCGGCG TCGAGGCCGT TATCCGAAAA
CAGGGAGAAG ACCCTCTTCC GGCAGAGGCC GACTGTCTGC TTGTAGCTGT CGGCGTGACG
GGTAATGCCG ACGGGCTTGG CCTCGAAGAG GCCGGTGTGG AAATTTCGAA GGGTTTCATT
CTGACCGACG ATCAGTGCAG AACGGCAGCC GATCATATCT TTGCTGTCGG CGATGTTCGC
GGCGGCATGC TGCTCGCCCA TAAAGCATCT GCAGAAGCGG CAATCGCAGT GGCGGCTATT
GCCGGAAAAC CGCTGCCCGC ACTCGATGAT ACAAAAATAC CGAGATGCGT CTATGTCGAA
CCGTCAGTCG CCAGCGTAGG GCTTACCGAA GAGCTGGCGA AAGCGAAAGG CTGCAAGGTT
ACGATCGGAC GGTCGATGTT TGCCGCATCC GGAAAAGCCA ACGCCTACGG AAATCTTGAA
GGTCTGGTGA AGCTGGTTTT CAATGCTTCC GACCTTCGTC TTCTCGGCGC GCATATACTC
GGTCACGGCG CGGTGGAACT GATCGGAGAG ATTGGCCTTG CACGGCATCT TGAAGTGACA
GCCGGAGATA TTGCGCATGC CGTTCATGCC CATCCGACGT TGTCGGAAAC CATCCGCGAG
GCTGCCGAAT ATGCGCTCGA TACGCAGGTA TCCGAAGGGT GA
|
|---|
| Protein sequence | MQDKMEKRAY DADLAVIGSG PGGYEAALRA ARLGMKVILV EKGSPGGVCV NWGCIPTKAL
LRSAGMFDDL SKASGYGVLL SDPGFDLAQA VKRSRNVALK LSKGIGFMLK KAGVEYRHGE
ARLSASHEIS VIRDGEQVGS FTSENIIIAT GGRFRELPGL VPDGRRIITS REALALKDVP
RSMLVLGGGA IGIEMAWFYA KAGTKVTVVE MMPQILPLEE AEIAEGLRRS FEKAGIEIHT
SAKLEQLSCR ESGVEAVIRK QGEDPLPAEA DCLLVAVGVT GNADGLGLEE AGVEISKGFI
LTDDQCRTAA DHIFAVGDVR GGMLLAHKAS AEAAIAVAAI AGKPLPALDD TKIPRCVYVE
PSVASVGLTE ELAKAKGCKV TIGRSMFAAS GKANAYGNLE GLVKLVFNAS DLRLLGAHIL
GHGAVELIGE IGLARHLEVT AGDIAHAVHA HPTLSETIRE AAEYALDTQV SEG
|
|---|
| |