Gene Clim_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1473 
Symbol 
ID6354786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1578898 
End bp1579479 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content55% 
IMG OID642669080 
Productpentapeptide repeat protein 
Protein accessionYP_001943508 
Protein GI189346979 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.978598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGG AGAACACAGA ACTTACCGAG AACGGGATTT TCGAGAACAT CGTCTTCGAC 
TCCGAAAACC CGGCTCGCGG CATGTACGAG GAGTGCCGCT TTCTGCGCTG CGGCTTCGCC 
AATGCGGATC TTTCAGGCGT GACCTTCAGA AACTGCGCTT TCGATGGGTG CGATTTCAGC 
CTTGCAAAGC TGAACAACAC CAGCCTGCAG GATGTCCGGT TCAGGGAGTG CAAGCTGCTC 
GGCCTGCAGT TCGGCGATTG CCGCACCTTT CTTCTGGAAC TCGACTTCGA ACGCTGCATG 
CTGAAGCTCT CGACCTTTTT CAAGCTGAAC CTCAAAAACA CCCGGTTCAG GCAGTGCGAC 
CTGCATGAGG CTGACTTTAC GGAAGCCGAC CTCACCGGTG CGTTTTTCGG GGAAAGCGAT 
CTCCTGCAGG CGATATTTTT TCACACGAAC CTCGAAAAAG CGGATTTCCG CACGGCTTTC 
AACTACTCCA TCAACCCCGA AACCAACCGC CTCCGAAAAG CGAGGTTCTC CCTGCCGGGA 
GTGATCGGCC TGCTCGATAC CTACGGCATC GAGATCGAGT AG
 
Protein sequence
MKQENTELTE NGIFENIVFD SENPARGMYE ECRFLRCGFA NADLSGVTFR NCAFDGCDFS 
LAKLNNTSLQ DVRFRECKLL GLQFGDCRTF LLELDFERCM LKLSTFFKLN LKNTRFRQCD 
LHEADFTEAD LTGAFFGESD LLQAIFFHTN LEKADFRTAF NYSINPETNR LRKARFSLPG 
VIGLLDTYGI EIE