Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1445 |
Symbol | |
ID | 6354758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1551224 |
End bp | 1551868 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642669055 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | YP_001943483 |
Protein GI | 189346954 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000779612 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCGGA CGTTGGCGGA CAGTGTGGTG GTTCTCGATT TCGAGACGAC GGGCTTGTCG CCGCAGTATG GCGACCGGGC TATCGAGATC GGTGCGGTGC TTGTGGAGCA TGGGGAGATT GTCGATCGTT TTCAAAAGCT GATGAATCCC GGGTTCCGGA TCAGTTCGTT TATCGAGGGT TATACCGGCA TCACCAATGA GATGCTGAAA GGGCAGCCTT GCTGCGAGGA GGTGATGGCC GAGTTTTCGG GGTTTATAGC CGGTCGTAAT ATCGTCGCGC ACAATGCTTC ATTCGACCGC CGTTTTCTGG ATTTCGAGCT GAAACGGGCG AAACGGGTAT ATGAAGGCGC CTGTTGCTGC TCTCTGCTCG TTTCGAGAAG GATTTATCAG GACTCTCCGA ACCACAGGCT GCAGACGCTG GTGACGCATG CCGGTATTCC GGAGACCGGA AGTTTTCACC GCGCGCTGGC GGATGCCGAG ATGACGGCGC TATTGTGGAT GTCGATGATC GACAGGATTC GCCGGCAATA CGGGATTTCG GCGATTACCT TCGATCAGCT GAGCGATCTC TCAAAAATTG ATAAGCTCTA TACCCACAGG TATCTTACCG CCCTGGCAGA GGAACTCTTG AGAAAGGAGG AGTGA
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Protein sequence | MQRTLADSVV VLDFETTGLS PQYGDRAIEI GAVLVEHGEI VDRFQKLMNP GFRISSFIEG YTGITNEMLK GQPCCEEVMA EFSGFIAGRN IVAHNASFDR RFLDFELKRA KRVYEGACCC SLLVSRRIYQ DSPNHRLQTL VTHAGIPETG SFHRALADAE MTALLWMSMI DRIRRQYGIS AITFDQLSDL SKIDKLYTHR YLTALAEELL RKEE
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